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<front>
<journal-meta>
<journal-id journal-id-type="nlm-ta">PLoS ONE</journal-id>
<journal-id journal-id-type="publisher-id">plos</journal-id>
<journal-id journal-id-type="pmc">plosone</journal-id>
<journal-title-group>
<journal-title>PLOS ONE</journal-title>
</journal-title-group>
<issn pub-type="epub">1932-6203</issn>
<publisher>
<publisher-name>Public Library of Science</publisher-name>
<publisher-loc>San Francisco, CA USA</publisher-loc>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.1371/journal.pone.0161943</article-id>
<article-id pub-id-type="publisher-id">PONE-D-16-16412</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Research Article</subject>
</subj-group>
<subj-group subj-group-type="Discipline-v3"><subject>Biology and life sciences</subject><subj-group><subject>Organisms</subject><subj-group><subject>Animals</subject><subj-group><subject>Vertebrates</subject><subj-group><subject>Amphibians</subject><subj-group><subject>Toads</subject></subj-group></subj-group></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Biology and life sciences</subject><subj-group><subject>Organisms</subject><subj-group><subject>Animals</subject><subj-group><subject>Vertebrates</subject><subj-group><subject>Amphibians</subject></subj-group></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Ecology and environmental sciences</subject><subj-group><subject>Conservation science</subject></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>People and places</subject><subj-group><subject>Geographical locations</subject><subj-group><subject>Europe</subject><subj-group><subject>Switzerland</subject></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Biology and life sciences</subject><subj-group><subject>Organisms</subject><subj-group><subject>Animals</subject><subj-group><subject>Vertebrates</subject><subj-group><subject>Amphibians</subject><subj-group><subject>Frogs</subject></subj-group></subj-group></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Engineering and technology</subject><subj-group><subject>Civil engineering</subject><subj-group><subject>Transportation infrastructure</subject><subj-group><subject>Roads</subject></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Engineering and technology</subject><subj-group><subject>Transportation</subject><subj-group><subject>Transportation infrastructure</subject><subj-group><subject>Roads</subject></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Biology and life sciences</subject><subj-group><subject>Behavior</subject><subj-group><subject>Animal behavior</subject><subj-group><subject>Animal migration</subject></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Biology and life sciences</subject><subj-group><subject>Zoology</subject><subj-group><subject>Animal behavior</subject><subj-group><subject>Animal migration</subject></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Biology and life sciences</subject><subj-group><subject>Ecology</subject><subj-group><subject>Ecosystems</subject><subj-group><subject>Ecosystem functioning</subject></subj-group></subj-group></subj-group></subj-group><subj-group subj-group-type="Discipline-v3"><subject>Ecology and environmental sciences</subject><subj-group><subject>Ecology</subject><subj-group><subject>Ecosystems</subject><subj-group><subject>Ecosystem functioning</subject></subj-group></subj-group></subj-group></subj-group></article-categories>
<title-group>
<article-title>Volunteer Conservation Action Data Reveals Large-Scale and Long-Term Negative Population Trends of a Widespread Amphibian, the Common Toad (<italic>Bufo bufo</italic>)</article-title>
<alt-title alt-title-type="running-head">Long-Term Decline of a Common Species</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" xlink:type="simple">
<name name-style="western">
<surname>Petrovan</surname>
<given-names>Silviu O.</given-names>
</name>
<xref ref-type="aff" rid="aff001"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff002"><sup>2</sup></xref>
</contrib>
<contrib contrib-type="author" corresp="yes" xlink:type="simple">
<contrib-id authenticated="true" contrib-id-type="orcid">http://orcid.org/0000-0002-4023-1001</contrib-id>
<name name-style="western">
<surname>Schmidt</surname>
<given-names>Benedikt R.</given-names>
</name>
<xref ref-type="aff" rid="aff003"><sup>3</sup></xref>
<xref ref-type="aff" rid="aff004"><sup>4</sup></xref>
<xref ref-type="corresp" rid="cor001">*</xref>
</contrib>
</contrib-group>
<aff id="aff001"><label>1</label> <addr-line>Froglife, 1 Loxley, Werrington, Peterborough, PE45BW, United Kingdom</addr-line></aff>
<aff id="aff002"><label>2</label> <addr-line>Centre for Environmental and Marine Sciences, Scarborough Campus, University of Hull, Filey Road, Scarborough, YO11 3AZ, United Kingdom</addr-line></aff>
<aff id="aff003"><label>3</label> <addr-line>Department of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland</addr-line></aff>
<aff id="aff004"><label>4</label> <addr-line>KARCH, Passage Maximilien-de-Meuron 6, 2000 Neuchâtel, Switzerland</addr-line></aff>
<contrib-group>
<contrib contrib-type="editor" xlink:type="simple">
<name name-style="western">
<surname>Rollins-Smith</surname>
<given-names>Louise A.</given-names>
</name>
<role>Editor</role>
<xref ref-type="aff" rid="edit1"/>
</contrib>
</contrib-group>
<aff id="edit1"><addr-line>Vanderbilt University School of Medicine, UNITED STATES</addr-line></aff>
<author-notes>
<fn fn-type="conflict" id="coi001">
<p>The authors have declared that no competing interests exist.</p>
</fn>
<fn fn-type="con">
<p><list list-type="simple">
<list-item><p><bold>Conceptualization:</bold> SOP BRS</p></list-item>
<list-item><p><bold>Data curation:</bold> SOP BRS</p></list-item>
<list-item><p><bold>Formal analysis:</bold> BRS</p></list-item>
<list-item><p><bold>Funding acquisition:</bold> SOP</p></list-item>
<list-item><p><bold>Investigation:</bold> SOP BRS</p></list-item>
<list-item><p><bold>Resources:</bold> SOP BRS</p></list-item>
<list-item><p><bold>Visualization:</bold> SOP BRS</p></list-item>
<list-item><p><bold>Writing – original draft:</bold> SOP BRS</p></list-item>
<list-item><p><bold>Writing – review &amp; editing:</bold> SOP BRS.</p></list-item></list></p>
</fn>
<corresp id="cor001">* E-mail: <email xlink:type="simple">benedikt.schmidt@ieu.uzh.ch</email></corresp>
</author-notes>
<pub-date pub-type="epub">
<day>5</day>
<month>10</month>
<year>2016</year>
</pub-date>
<pub-date pub-type="collection">
<year>2016</year>
</pub-date>
<volume>11</volume>
<issue>10</issue>
<elocation-id>e0161943</elocation-id>
<history>
<date date-type="received">
<day>22</day>
<month>4</month>
<year>2016</year>
</date>
<date date-type="accepted">
<day>15</day>
<month>8</month>
<year>2016</year>
</date>
</history>
<permissions>
<copyright-year>2016</copyright-year>
<copyright-holder>Petrovan, Schmidt</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/" xlink:type="simple">
<license-p>This is an open access article distributed under the terms of the <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/4.0/" xlink:type="simple">Creative Commons Attribution License</ext-link>, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</license-p>
</license>
</permissions>
<self-uri content-type="pdf" xlink:href="info:doi/10.1371/journal.pone.0161943"/>
<abstract>
<p>Rare and threatened species are the most frequent focus of conservation science and action. With the ongoing shift from single-species conservation towards the preservation of ecosystem services, there is a greater need to understand abundance trends of common species because declines in common species can disproportionately impact ecosystems function. We used volunteer-collected data in two European countries, the United Kingdom (UK) and Switzerland, since the 1970s to assess national and regional trends for one of Europe’s most abundant amphibian species, the common toad (<italic>Bufo bufo</italic>). Millions of toads were moved by volunteers across roads during this period in an effort to protect them from road traffic. For Switzerland, we additionally estimated trends for the common frog (<italic>Rana temporaria</italic>), a similarly widespread and common amphibian species. We used state-space models to account for variability in detection and effort and included only populations with at least 5 years of data; 153 populations for the UK and 141 for Switzerland. Common toads declined continuously in each decade in both countries since the 1980s. Given the declines, this common species almost qualifies for International Union for the Conservation of Nature (IUCN) red-listing over this period despite volunteer conservation efforts. Reasons for the declines and wider impacts remain unknown. By contrast, common frog populations were stable or increasing in Switzerland, although there was evidence of declines after 2003. “Toads on Roads” schemes are vital citizen conservation action projects, and the data from such projects can be used for large scale trend estimations of widespread amphibians. We highlight the need for increased research into the status of common amphibian species in addition to conservation efforts focusing on rare and threatened species.</p>
</abstract>
<funding-group>
<award-group id="award001">
<funding-source>
<institution>Esmée Fairbairn Foundation (GB)</institution>
</funding-source>
<principal-award-recipient>
<name name-style="western">
<surname>Petrovan</surname>
<given-names>Silviu O.</given-names>
</name>
</principal-award-recipient>
</award-group>
<funding-statement>SP is supported by a grant from Esmée Fairbairn Foundation to Froglife (grant ref nr 14-0534). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. Volunteer conservation action is generally not financially supported. Sometimes volunteers are supported by local authorities (e.g. supply of materials, help with setting up drift fences).</funding-statement>
</funding-group>
<counts>
<fig-count count="1"/>
<table-count count="1"/>
<page-count count="12"/>
</counts>
<custom-meta-group>
<custom-meta id="data-availability">
<meta-name>Data Availability</meta-name>
<meta-value>The data analysed in this article are available as an electronic supplement. More comprehensive data, including precise locality information, are available on request from Froglife (<ext-link ext-link-type="uri" xlink:href="http://www.froglife.org" xlink:type="simple">www.froglife.org</ext-link>) and karch (<ext-link ext-link-type="uri" xlink:href="http://www.karch.ch" xlink:type="simple">www.karch.ch</ext-link>) subject to third party consent and agreements.</meta-value>
</custom-meta>
</custom-meta-group>
</article-meta>
</front>
<body>
<sec id="sec001" sec-type="intro">
<title>Introduction</title>
<p>There is a current shift in conservation science away from the conservation of rare and endangered species towards the maintenance of ecosystem services [<xref ref-type="bibr" rid="pone.0161943.ref001">1</xref>]. Common species, while a small category in terms of species richness, can have a disproportionate impact in providing vital ecosystem structure and functions, primarily as a consequence of their overall biomass contribution [<xref ref-type="bibr" rid="pone.0161943.ref002">2</xref>, <xref ref-type="bibr" rid="pone.0161943.ref003">3</xref>]. The major ecological significance of widespread and common species as well as the urgency in identifying, understanding, and halting their declines, has been repeatedly highlighted in recent years [<xref ref-type="bibr" rid="pone.0161943.ref002">2</xref>, <xref ref-type="bibr" rid="pone.0161943.ref004">4</xref>–<xref ref-type="bibr" rid="pone.0161943.ref007">7</xref>]. Despite this, species conservation action and resources largely focus on rare species on the IUCN Red List. The rare species are frequently habitat specialists with small ranges. Common species often remain insufficiently monitored and neglected if declining at rates that do not make them regionally threatened and can in turn become generally rarer and extinct at the local level before prompting changes in policies [<xref ref-type="bibr" rid="pone.0161943.ref008">8</xref>]. Common or even abundant species that have declined dramatically in recent decades encompass a wide range of taxonomic groups, most notably moths, butterflies, fish and birds. They include species that are not directly exploited by humans but are impacted by the wide-ranging processes related to agricultural intensification and urbanisation [<xref ref-type="bibr" rid="pone.0161943.ref007">7</xref>, <xref ref-type="bibr" rid="pone.0161943.ref009">9</xref>, <xref ref-type="bibr" rid="pone.0161943.ref010">10</xref>]. However, despite the ongoing global amphibian decline [<xref ref-type="bibr" rid="pone.0161943.ref011">11</xref>, <xref ref-type="bibr" rid="pone.0161943.ref012">12</xref>] and some recent progress in establishing new monitoring schemes, data on national- or continental-scale abundance trends of widespread and common amphibians remains particularly scarce.</p>
<p>Here, we use data from long-term and large-scale conservation action by volunteers to quantify population trends for one of Europe’s most common amphibians, the common toad, <italic>Bufo bufo</italic>. The common toad is a wide-ranging, adaptable and relatively abundant species listed as “least concern” by the IUCN [<xref ref-type="bibr" rid="pone.0161943.ref013">13</xref>] even though declines have been reported throughout its range [<xref ref-type="bibr" rid="pone.0161943.ref014">14</xref>–<xref ref-type="bibr" rid="pone.0161943.ref017">17</xref>]. The causes for these declines or their actual extent remain unclear but they are likely factors that operate at the landscape scale. In particular, habitat loss and fragmentation, including road impacts, and the effects of climate change have been blamed in the past [<xref ref-type="bibr" rid="pone.0161943.ref015">15</xref>, <xref ref-type="bibr" rid="pone.0161943.ref016">16</xref>, <xref ref-type="bibr" rid="pone.0161943.ref018">18</xref>, <xref ref-type="bibr" rid="pone.0161943.ref019">19</xref>].</p>
<p>Similar to other amphibian species, toad populations can fluctuate widely between years, and sufficiently long time series are needed in order to quantify trends [<xref ref-type="bibr" rid="pone.0161943.ref020">20</xref>]. Also, common toads are mainly nocturnal, occupy a diverse range of habitats including farmland, are explosive breeders with a very short breeding season, and typically breed in vegetated areas of large bodies of water including lakes. As such, gathering data at the regional or national scale is logistically challenging. However, while robust abundance data at the regional or national scale for common amphibians are generally very scarce, such data are available for this species. Toads undertake large-scale spring breeding migrations, which often are intersected by roads and, consequently, the species typically represents the highest percentage of road-killed amphibians across much of Europe [<xref ref-type="bibr" rid="pone.0161943.ref021">21</xref>–<xref ref-type="bibr" rid="pone.0161943.ref023">23</xref>]. The plight of toads during annual mass mortality events on some roads [<xref ref-type="bibr" rid="pone.0161943.ref024">24</xref>, <xref ref-type="bibr" rid="pone.0161943.ref025">25</xref>] has led to the establishment across Europe of “toad patrols” as early as the 1950s [<xref ref-type="bibr" rid="pone.0161943.ref022">22</xref>], where volunteers collect migrating amphibians and carry them across the road and towards the breeding site. Significantly, this has marked in many countries the beginning of conservation action for amphibians, has generated some of the earliest examples of citizen science data for this group, and toad patrols still represent one of the largest conservation actions undertaken by volunteers [<xref ref-type="bibr" rid="pone.0161943.ref026">26</xref>, <xref ref-type="bibr" rid="pone.0161943.ref027">27</xref>]. Over 90,000 adult toads are currently carried across roads every year in some 160 sites by such volunteer groups in the UK (<ext-link ext-link-type="uri" xlink:href="http://www.froglife.org/what-we-do/facts-figures/" xlink:type="simple">http://www.froglife.org/what-we-do/facts-figures/</ext-link>) and 700,000 amphibians (all species) are moved at more than 440 sites in Switzerland [<xref ref-type="bibr" rid="pone.0161943.ref022">22</xref>]. These sites, many of them established as early as the 1970s or 1980s, are widely distributed at a national scale in both rural and semi-urban settings. They encompass a broad range of toad population sizes, from less than 100 adult individuals to exceptional populations of 5,000–12,000 adults moved annually, therefore creating a valuable dataset for the analysis of population trends. Equally, other amphibian species are also moved at the same time by volunteers rescuing toads, especially common frogs <italic>Rana temporaria</italic>. Common frogs are a similarly widespread IUCN “least concern” species with “stable” trends, although some declines have been recorded in parts of their range [<xref ref-type="bibr" rid="pone.0161943.ref028">28</xref>]. Including this species in the analysis can therefore act as a control for trend estimation for common toads as well as indicate potential differences in responses to environmental change by the two species.</p>
<p>Knowing whether common species are stable or in decline is vital for directing conservation efforts and maintaining ecosystem services provided by amphibians [<xref ref-type="bibr" rid="pone.0161943.ref001">1</xref>, <xref ref-type="bibr" rid="pone.0161943.ref029">29</xref>], yet these data are typically lacking. As stipulated by IUCN, one can use both distribution and abundance data to quantify population declines, and both have been used for amphibians [<xref ref-type="bibr" rid="pone.0161943.ref011">11</xref>, <xref ref-type="bibr" rid="pone.0161943.ref017">17</xref>, <xref ref-type="bibr" rid="pone.0161943.ref030">30</xref>]. We used volunteer-collected data as part of the “Toads on Roads” project coordinated and collated by Froglife in the UK and the amphibian migration database maintained by Koordinationsstelle für Amphibien- und Reptilienschutz in der Schweiz (KARCH) in Switzerland in order to identify and quantify long-term trends in population size (abundance) for these common species at national and regional scales. We hypothesised that such datasets can provide substantial information on historical trends. We estimated trends for different decades such that we could assess whether the rate of decline remained stable or changed through time.</p>
</sec>
<sec id="sec002" sec-type="materials|methods">
<title>Methods</title>
<sec id="sec003">
<title>Data collection</title>
<p>Data on numbers of toads and frogs moved by volunteers during spring migrations were collected at the end of the migration season which typically runs between March and April. Standard forms were completed by the patrol leader every night of the season (typically for 25–30 nights every year) collated into a season total, and sent off to be centralised. We used the seasonal total of toads and frogs moving towards the pond rather than the daily counts in the analysis. Volunteers collected and counted all the individual toads by repeatedly surveying a stretch of the road during each survey night. However, at some sites in the UK and most sites in Switzerland, temporary plastic fences were used in order to prevent toads from accessing the road, and the amphibians were then collected along the fences [<xref ref-type="bibr" rid="pone.0161943.ref022">22</xref>]. Given the timing, selected to coincide with the breeding season, the vast majority of the individuals recorded was represented by adults. Toads and other amphibians were collected in plastic buckets, taken to the other side of the road and released, often near the breeding area.</p>
<p>We used data from volunteer groups collected from 1975 to 2014 in the UK and from 1973 to 2012 in Switzerland (see <xref ref-type="sec" rid="sec012">Supporting Information</xref>), and we only included sites with at least 5 years of data so that enough years were included to remove the bias effects of natural population variations [<xref ref-type="bibr" rid="pone.0161943.ref020">20</xref>, <xref ref-type="bibr" rid="pone.0161943.ref031">31</xref>, <xref ref-type="bibr" rid="pone.0161943.ref032">32</xref>] and to establish a trend. Given the small number of populations between 1975 and 1984 for the UK, we used 1985–2014 data only. For the UK, we included a regional component by splitting the data into 5 regions following a similar previous analysis [<xref ref-type="bibr" rid="pone.0161943.ref015">15</xref>]. The populations were structured by county and separated into Northern, Western, Central, Eastern and South-Eastern. Regions are defined as follows: North (Scotland, Northumberland, Cumbria, Durham, Yorkshire, Lancashire, Cheshire and Derbyshire); West (Wales, Shropshire, Staffordshire, Herefordshire, Worcestershire, Gloucestershire, Wiltshire, Dorset, Somerset, Devon, Cornwall); Central (Nottinghamshire, Leicestershire, Northamptonshire, Rutland, Cambridgeshire, Warwickshire, Oxfordshire, Buckinghamshire, Bedfordshire); East (Lincolnshire, Norfolk, Suffolk, Essex, Hertfordshire); South-East (Berkshire, London, Hampshire, Surrey, Kent, Sussex, Isle of Wight). For Switzerland, we also included data on the abundance of the common frog (<italic>Rana temporaria</italic>) for comparison.</p>
</sec>
<sec id="sec004">
<title>Statistical analysis</title>
<p>After removing sites with less than 5 years of data, a total of 153 sites were included in the analysis for the UK and 141 for common toads and 135 for common frogs for Switzerland. The average length of time series for common toads in the UK was 14.1 years. In Switzerland, time series lengths for common toads and common frogs were 14.3 years and 14.0 years, respectively.</p>
<p>The data were collected by a large number of volunteers in many different places and years using similar but not identical methods. It is thus important to account for variation in sampling effort between sites and years [<xref ref-type="bibr" rid="pone.0161943.ref033">33</xref>]. Estimating detection probabilities and adjusting counts is a commonly used method to adjust for variation in sampling effort [<xref ref-type="bibr" rid="pone.0161943.ref034">34</xref>]. Therefore, we used the open N-mixture model for spatially replicated repeated count data [<xref ref-type="bibr" rid="pone.0161943.ref035">35</xref>] because this model is highly suitable for our data [<xref ref-type="bibr" rid="pone.0161943.ref036">36</xref>]. This model can be used to estimate population trends while accounting for variation in sampling effort and detectability because it assumes that the number of individuals is generally underestimated. The Dail-Madsen model was successfully employed for the analysis of similar amphibian population data [<xref ref-type="bibr" rid="pone.0161943.ref037">37</xref>–<xref ref-type="bibr" rid="pone.0161943.ref039">39</xref>].</p>
<p>Population trend is commonly estimated using a regression of abundance against calendar year [<xref ref-type="bibr" rid="pone.0161943.ref040">40</xref>–<xref ref-type="bibr" rid="pone.0161943.ref042">42</xref>]. We used population growth rate as our estimate of trend because we believe that it is a biologically more meaningful metric [<xref ref-type="bibr" rid="pone.0161943.ref043">43</xref>–<xref ref-type="bibr" rid="pone.0161943.ref045">45</xref>]. The model is [<xref ref-type="bibr" rid="pone.0161943.ref035">35</xref>, <xref ref-type="bibr" rid="pone.0161943.ref036">36</xref>]
<disp-formula id="pone.0161943.e001">
<alternatives>
<graphic id="pone.0161943.e001g" mimetype="image" position="anchor" xlink:href="info:doi/10.1371/journal.pone.0161943.e001" xlink:type="simple"/>
<mml:math display="block" id="M1">
<mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:msub><mml:mo>∼</mml:mo><mml:mtext>Poisson</mml:mtext><mml:mo>(</mml:mo><mml:mi>λ</mml:mi><mml:msub><mml:mi>N</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mtext>-</mml:mtext><mml:mn>1</mml:mn></mml:mrow></mml:msub><mml:mo>)</mml:mo></mml:mrow>
</mml:math>
</alternatives>
<label>(eq 1)</label>
</disp-formula>
where <italic>N</italic> is population size, <italic>i</italic> and <italic>t</italic> are indices for site and year, respectively, λ is population growth rate, and <italic>N</italic><sub><italic>i</italic>,<italic>t</italic></sub> is a Poisson random variable which allows for demographic stochasticity. Given this definition, the trend quantifies a proportional change in abundance (i.e., the population multiplication rate) rather than an absolute change. The biological trend model is related to the counts <italic>y</italic><sub><italic>i</italic>,<italic>t</italic></sub> using
<disp-formula id="pone.0161943.e002">
<alternatives>
<graphic id="pone.0161943.e002g" mimetype="image" position="anchor" xlink:href="info:doi/10.1371/journal.pone.0161943.e002" xlink:type="simple"/>
<mml:math display="block" id="M2">
<mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:msub><mml:mo>∼</mml:mo><mml:mtext>Binomial</mml:mtext><mml:mo stretchy="false">(</mml:mo><mml:mi>p</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>N</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:msub><mml:mo stretchy="false">)</mml:mo></mml:mrow>
</mml:math>
</alternatives>
<label>(eq 2)</label>
</disp-formula>
where <italic>p</italic> is detection probability [<xref ref-type="bibr" rid="pone.0161943.ref035">35</xref>, <xref ref-type="bibr" rid="pone.0161943.ref036">36</xref>]. We fitted separate models for the Swiss und UK data and estimated parameters for both countries in independent analyses. For the purpose of our analysis, we estimated a mean λ per decade. Within the UK, we estimated a region- and decade-specific λ in a second analysis. Mean λ reduces the effects of random variation among years and sites. Detection probability <italic>p</italic> was allowed to vary among decades and regions (the latter only in the second analysis).</p>
<p>Model fitting followed the procedures outlined in [<xref ref-type="bibr" rid="pone.0161943.ref046">46</xref>]. We modified code available from the electronic supplement of Hostetler and Chandler [<xref ref-type="bibr" rid="pone.0161943.ref036">36</xref>] and fitted the models in the Bayesian software JAGS [<xref ref-type="bibr" rid="pone.0161943.ref047">47</xref>] using R and the R package jagsUI [<xref ref-type="bibr" rid="pone.0161943.ref048">48</xref>, <xref ref-type="bibr" rid="pone.0161943.ref049">49</xref>]. To fit the models, we used a Poisson distribution to describe initial abundance <italic>N</italic><sub><italic>i</italic>,1</sub>. Because time series started in different years, we wrote the model in JAGS in such a way that <italic>N</italic><sub><italic>i</italic>,<italic>1</italic></sub> was replaced with <italic>N</italic><sub><italic>i</italic>,<italic>first t</italic></sub> where <italic>first</italic> was the first year of the time series <italic>i</italic>. We specified diffuse uniform priors for all parameters (<italic>p</italic>, λ and <italic>N</italic><sub><italic>i</italic>,<italic>first</italic></sub>) to be as uninformative as possible. For each model, we ran three Markov chains with 10000 iterations each, discarded the first 2000 iterations as burn-in and thinned the remainder by one in ten. Convergence was assessed using the Brooks–Gelman–Rubin <inline-formula id="pone.0161943.e003"><alternatives><graphic id="pone.0161943.e003g" mimetype="image" position="anchor" xlink:href="info:doi/10.1371/journal.pone.0161943.e003" xlink:type="simple"/><mml:math display="inline" id="M3"><mml:mover accent="true"><mml:mi>R</mml:mi><mml:mo>^</mml:mo></mml:mover></mml:math></alternatives></inline-formula> statistic [<xref ref-type="bibr" rid="pone.0161943.ref046">46</xref>].</p>
</sec>
</sec>
<sec id="sec005" sec-type="results">
<title>Results</title>
<p>Detectability varied among countries, regions, decades and species from 0.198 to 0.773 (<xref ref-type="table" rid="pone.0161943.t001">Table 1</xref>). Overall, population growth rates were negative for most decades in both Switzerland and the UK (<xref ref-type="fig" rid="pone.0161943.g001">Fig 1</xref>), implying that toad abundance declined in both countries since the mid-1980s. In the UK, the mean population growth rates for the decades 1985 to 1994, 1995 to 2004 and 2005 to 2014 were 0.989 (95% CRI: 0.985, 0.992), 0.929 (95% CRI: 0.927, 0.932) and 0.973 (95% CRI: 0.971, 0.975), respectively (<xref ref-type="fig" rid="pone.0161943.g001">Fig 1</xref>). For the UK, where regional analysis was included, toads declined in almost all regions and all decades, although declines seemed to become reversed in the 2005–2014 decade in region West, encompassing Wales and South-West England. The most pronounced declines in the UK were in South-East England, while in the Eastern region, comprising mostly East Anglia, trend estimations indicated that initial severe declines in previous decades were followed by a recovery since 2005, although not enough to reverse the overall decline (<xref ref-type="fig" rid="pone.0161943.g001">Fig 1</xref>).</p>
<fig id="pone.0161943.g001" position="float">
<object-id pub-id-type="doi">10.1371/journal.pone.0161943.g001</object-id>
<label>Fig 1</label>
<caption>
<title>Estimated mean population growth rates.</title>
<p>Estimates (and 95% credible intervals; some intervals are smaller than the symbols) are shown for four decades for the common toad (<italic>Bufo bufo</italic>) and the common frog (<italic>Rana temporaria</italic>) in Switzerland (left panel) and for three decades for the common toad (<italic>Bufo bufo</italic>) in five regions of the United Kingdom (right panel).</p>
</caption>
<graphic mimetype="image" position="float" xlink:href="info:doi/10.1371/journal.pone.0161943.g001" xlink:type="simple"/>
</fig>
<table-wrap id="pone.0161943.t001" position="float">
<object-id pub-id-type="doi">10.1371/journal.pone.0161943.t001</object-id>
<label>Table 1</label> <caption><title>Estimated detection probabilities (and 95% credible intervals).</title></caption>
<alternatives>
<graphic id="pone.0161943.t001g" mimetype="image" position="float" xlink:href="info:doi/10.1371/journal.pone.0161943.t001" xlink:type="simple"/>
<table>
<colgroup>
<col align="left" valign="middle"/>
<col align="left" valign="middle"/>
<col align="left" valign="middle"/>
<col align="left" valign="middle"/>
<col align="left" valign="middle"/>
<col align="left" valign="middle"/>
<col align="left" valign="middle"/>
</colgroup>
<thead>
<tr>
<th align="left" style="border-top:thick">Country</th>
<th align="left" style="border-top:thick">Species</th>
<th align="left" style="border-top:thick">Region</th>
<th align="center" colspan="4" style="border-top:thick">Decade</th>
</tr>
<tr>
<th align="left"/>
<th align="left"/>
<th align="left"/>
<th align="left"/>
<th align="left">1985–1994</th>
<th align="left">1995–2004</th>
<th align="left">2005–2014</th>
</tr>
</thead>
<tbody>
<tr>
<td align="left">UK</td>
<td align="left"><italic>Bufo bufo</italic></td>
<td align="left">North</td>
<td align="left"/>
<td align="left">0.233</td>
<td align="left">0.402</td>
<td align="left">0.506</td>
</tr>
<tr>
<td align="left"/>
<td align="left"/>
<td align="left"/>
<td align="left"/>
<td align="left">(0.226, 0.240)</td>
<td align="left">(0.393, 0.410)</td>
<td align="left">(0.494, 0.517)</td>
</tr>
<tr>
<td align="left"/>
<td align="left"/>
<td align="left">West</td>
<td align="left"/>
<td align="left">0.304</td>
<td align="left">0.379</td>
<td align="left">0.470</td>
</tr>
<tr>
<td align="left"/>
<td align="left"/>
<td align="left"/>
<td align="left"/>
<td align="left">(0.293, 0.316)</td>
<td align="left">(0.371, 0.389)</td>
<td align="left">(0.462, 0.478)</td>
</tr>
<tr>
<td align="left"/>
<td align="left"/>
<td align="left">Central</td>
<td align="left"/>
<td align="left">0.234</td>
<td align="left">0.373</td>
<td align="left">0.525</td>
</tr>
<tr>
<td align="left"/>
<td align="left"/>
<td align="left"/>
<td align="left"/>
<td align="left">(0.227, 0.240)</td>
<td align="left">(0.365, 0.381)</td>
<td align="left">(0.511, 0.538)</td>
</tr>
<tr>
<td align="left"/>
<td align="left"/>
<td align="left">East</td>
<td align="left"/>
<td align="left">0.198</td>
<td align="left">0.350</td>
<td align="left">0.455</td>
</tr>
<tr>
<td align="left"/>
<td align="left"/>
<td align="left"/>
<td align="left"/>
<td align="left">(0.192, 0.205)</td>
<td align="left">(0.328, 0.372)</td>
<td align="left">(0.441, 0.470)</td>
</tr>
<tr>
<td align="left"/>
<td align="left"/>
<td align="left">South-east</td>
<td align="left"/>
<td align="left">0.557</td>
<td align="left">0.541</td>
<td align="left">0.773</td>
</tr>
<tr>
<td align="left"/>
<td align="left"/>
<td align="left"/>
<td align="left"/>
<td align="left">(0.536, 0.579)</td>
<td align="left">(0.523, 0.557)</td>
<td align="left">(0.756, 0.790)</td>
</tr>
<tr>
<td align="left"/>
<td align="left"/>
<td align="left"/>
<td align="left">1973–1982</td>
<td align="left">1983–1992</td>
<td align="left">1993–2002</td>
<td align="left">2003–2012</td>
</tr>
<tr>
<td align="left">Switzerland</td>
<td align="left"><italic>Bufo bufo</italic></td>
<td align="left"/>
<td align="left">0.390</td>
<td align="left">0.358</td>
<td align="left">0.420</td>
<td align="left">0.443</td>
</tr>
<tr>
<td align="left"/>
<td align="left"/>
<td align="left"/>
<td align="left">(0.384, 0.395)</td>
<td align="left">(0.355, 0.362)</td>
<td align="left">(0.416, 0.424)</td>
<td align="left">(0.438, 0.449)</td>
</tr>
<tr>
<td align="left"/>
<td align="left"><italic>Rana temporaria</italic></td>
<td align="left"/>
<td align="left">0.362</td>
<td align="left">0.406</td>
<td align="left">0.323</td>
<td align="left">0.434</td>
</tr>
<tr>
<td align="left"/>
<td align="left"/>
<td align="left"/>
<td align="left">(0.352, 0.373)</td>
<td align="left">(0.400, 0.411)</td>
<td align="left">(0.320, 0.327)</td>
<td align="left">(0.428, 0.439)</td>
</tr>
</tbody>
</table>
</alternatives>
</table-wrap>
<p>In Switzerland, the mean population growth rates for common toad (<italic>Bufo bufo</italic>) populations for the four decades 1973 to 1982, 1983 to 1992, 1993 to 2002 and 2003 to 2012 were 1.081 (95% CRI: 1.077, 1.084), 0.977 (95% CRI: 0.975, 0.979), 0.982 (95% CRI: 0.980, 0.984), and 0.980 (95% CRI: 0.977, 0.982), respectively (<xref ref-type="fig" rid="pone.0161943.g001">Fig 1</xref>). The corresponding values for the common frog populations (<italic>Rana temporaria</italic>) were 1.034 (95% CRI: 1.026, 1.041), 1.025 (95% CRI: 1.021, 1.028), 1.018 (95% CRI: 1.016, 1.021) and 0.925 (95% CRI: 0.949, 0.954).</p>
</sec>
<sec id="sec006" sec-type="conclusions">
<title>Discussion</title>
<sec id="sec007">
<title>Volunteer conservation action as a long-term monitoring tool</title>
<p>Citizen science projects have been gaining attention due to their potential for collecting large amounts of data over wide spatial and temporal scales as well as a means of engaging the public in conservation efforts. Importantly however, the primary motivation for “toad patrols” was the conservation action of protecting amphibians from road mortality rather than surveys or data collection, making this dataset relatively unique as volunteers collect data measuring not just the number of animals present but also their own success in moving them to safety. Expanding such schemes that provide both highly valuable monitoring data and a measurable conservation action that attracts and engages people could be a successful model for other citizen science wildlife projects [<xref ref-type="bibr" rid="pone.0161943.ref050">50</xref>]. Cooke [<xref ref-type="bibr" rid="pone.0161943.ref019">19</xref>] demonstrated that the decline in numbers of toads recorded killed on roads at three unpatrolled sites in the UK between 1974 and 2010 correlated strongly with numbers of adults reaching the ponds, making the numbers of individuals at road crossing points a suitable measure of population abundance. In our analysis, we used statistical models to account for imperfect detection and variation in sampling effort. Detection probabilities were sometimes low but this may be an effect of the structure of the model. If repeated counts within years were available, we might have been able to model detectability in a better way [<xref ref-type="bibr" rid="pone.0161943.ref036">36</xref>]. Allowing for environmental stochasticity in the models [<xref ref-type="bibr" rid="pone.0161943.ref036">36</xref>] might lead to higher estimates of detection probabilities because the model may be better able to disentangle variation in detection and natural population fluctuations.</p>
</sec>
<sec id="sec008">
<title>Road-based surveys for national-scale abundance trends estimations for common amphibians</title>
<p>The selection of our sites was not random but rather volunteers chose them based on observing amphibian mortality on specific road sections, and as such, it is unclear how representative they are for toad populations at a national scale in each country. However, declines of common toads (based on presence/absence data) in Switzerland were also independently found in a survey where sites were selected randomly [<xref ref-type="bibr" rid="pone.0161943.ref017">17</xref>]. There are two reasons why we believe that the studied populations are representative nationally and important. First, roads are known to have strong negative effects on amphibian populations [<xref ref-type="bibr" rid="pone.0161943.ref051">51</xref>]. Both the UK and Switzerland have some of the densest and most intensely used road networks in the world when compared to the total surface area of the country [<xref ref-type="bibr" rid="pone.0161943.ref052">52</xref>]. For example, Switzerland has a road density of 2.7 km/km<sup>2</sup> [<xref ref-type="bibr" rid="pone.0161943.ref022">22</xref>] and considerably higher in the lowlands. Similar to other Western or Central European countries, given the high habitat fragmentation degree in both the UK and Switzerland, there are probably few areas other than mountains where toad populations migrating 1 km or more towards the breeding area would not have to cross at least one road. Thus, it seems likely that the majority of UK and Swiss toad populations are affected to some extent by roads. Second, even though the sample is not random, this dataset represents hundreds of populations that benefit from conservation action, and one might thus expect that they fare better than other populations with no such conservation action.</p>
</sec>
<sec id="sec009">
<title>Significant and continuous declines of common toads since 1980s</title>
<p>An annual trend of 0.96 implies that a population will decline by more than 30% in less than ten years. Given this magnitude of decline, a population would qualify as “vulnerable” under IUCN Red List criterion A2 (“Population reduction observed, estimated, inferred, or suspected in the past where the causes of reduction may not have ceased OR may not be understood OR may not be reversible.”). The observed declines in our dataset were close to this figure or even surpassed it at both regional level and national level (common toads in the UK between 1995 and 2004). The fact that toad abundance significantly declined across both countries since the 1980s even at sites where there was an obvious and long term conservation action in place, (i.e. moving individual toads across the roads by volunteers) is troubling. Our results appear to confirm that such actions are not sufficient to prevent long-term declines, as previously observed for 33 toad populations in Italy [<xref ref-type="bibr" rid="pone.0161943.ref016">16</xref>]. Reasons for the decline of the common toad might include the fact that volunteers in “Toads on Roads” projects only target adult migration towards the wetland but not the unpredictable adult return migration or the movement of juveniles dispersing from the breeding area in late summer. Thus, the postmetamorphic juvenile stage, whose survival is crucial for amphibian population dynamics [<xref ref-type="bibr" rid="pone.0161943.ref053">53</xref>–<xref ref-type="bibr" rid="pone.0161943.ref055">55</xref>], is not protected from road mortality [<xref ref-type="bibr" rid="pone.0161943.ref022">22</xref>]. Road traffic and car numbers have increased substantially in both countries since 1980, almost doubling in the UK within that period to 35 million vehicles registered in 2013 [<xref ref-type="bibr" rid="pone.0161943.ref056">56</xref>], potentially making it increasingly difficult for juvenile toads moving over the road to escape car traffic. Thus, large and exceptional amphibian populations should be protected from road impacts and habitat loss by adequate mitigation such as the construction of underpasses rather than solely through such volunteer actions. However, questions remain about the effectiveness of toad tunnels for juveniles [<xref ref-type="bibr" rid="pone.0161943.ref022">22</xref>].</p>
<p>Additionally, road mortality represents only one potential cause of decline, and other factors such as climate change and increasingly mild winters [<xref ref-type="bibr" rid="pone.0161943.ref018">18</xref>], agricultural intensification and widespread habitat loss or degradation, as well as emergent diseases [<xref ref-type="bibr" rid="pone.0161943.ref057">57</xref>], remain unresolved and ongoing and may affect toads both in their aquatic and terrestrial habitats. The fact that toad declines appeared most pronounced in South-East England, the most densely populated region in the UK, is important and requires further investigation. Similarly, the steep decline in Switzerland since the 1980s might be linked with both road traffic increases, changing climate, and widespread habitat degradation as already observed in declines of other widespread species. A potential solution to halt declines would be to urgently incorporate widespread and common species such as toads into wider conservation and planning policy initiatives and target large-scale improvements of the general landscape using networks of agri-environment scheme options and landscape-scale connectivity projects.</p>
<p>It is likely that in the absence of volunteer efforts toad declines would have been more marked and more populations would have become extinct given the unsustainable levels of adult mortality, as road mortality can drive toad populations to extinction [<xref ref-type="bibr" rid="pone.0161943.ref058">58</xref>]. This was the case at 3 sites monitored in Cambridgeshire, UK where no animals were moved by volunteers and instead effort concentrated on annual recording of toad mortality and traffic levels on the road from 1974 until all three populations collapsed by 2010 [<xref ref-type="bibr" rid="pone.0161943.ref019">19</xref>]. Local extinction sites are almost certainly under-represented in our datasets as volunteers may become disheartened following prolonged declines and give up patrolling the site once the numbers are low.</p>
<p>Data collected partly from the same period seems to indicate that for the other widespread and abundant amphibian species, the common frog, populations appear to have stabilised in both Switzerland and the UK ([<xref ref-type="bibr" rid="pone.0161943.ref015">15</xref>, <xref ref-type="bibr" rid="pone.0161943.ref017">17</xref>], this study), although our analysis indicates recent declines in Switzerland. The reasons for this disparity in trends are unknown. Carrier and Beebee [<xref ref-type="bibr" rid="pone.0161943.ref015">15</xref>] suggested that common frogs are better adapted to breed in shallow and small bodies of water, including garden ponds, which seem to have provided important refuge for the species in the face of lost habitats in farmland areas. It is, however, also possible that common frogs are less impacted at the population level by road mortality either for juveniles only or for both juveniles and adults. Understanding why one common generalist species declines while the other appears to be stable would be an important focus for future research.</p>
</sec>
<sec id="sec010">
<title>Common species continue to decline in Europe but largely remain neglected</title>
<p>Despite some recent increase in interest in the value of common species and the importance of their declines [<xref ref-type="bibr" rid="pone.0161943.ref004">4</xref>], conservation resources, including monitoring as well as government policy at a national level, remain almost entirely focused on rare species which are facing regional or global extinctions in the near future. Both common birds and common butterfly species, including former pest species, are declining in Europe while effective conservation programs for habitat specialists mean that at least some of the rarer species are increasing in abundance [<xref ref-type="bibr" rid="pone.0161943.ref007">7</xref>,<xref ref-type="bibr" rid="pone.0161943.ref009">9</xref>]. However, commonness itself is rare, and even moderate declines in a small number of common species can inherently mean the loss of vast numbers of individuals and biomass over large areas with consequences across the trophic chain, habitat or ecosystem function [<xref ref-type="bibr" rid="pone.0161943.ref002">2</xref>, <xref ref-type="bibr" rid="pone.0161943.ref010">10</xref>]. Common toads for example, are important invertebrate predators and also a regular food source for a wide range of species in Europe, including mammals, reptiles and birds (for a review on ecosystem functions of amphibians see Hocking and Babbitt [<xref ref-type="bibr" rid="pone.0161943.ref029">29</xref>].</p>
</sec>
</sec>
<sec id="sec011" sec-type="conclusions">
<title>Conclusions</title>
<p>The long-term and ongoing decline of one of Europe’s most common amphibians is a significant cause for concern and has unknown wider impacts. Yet, this decline has been uncovered almost incidentally given the lack of specific long-term monitoring data for common amphibians. We demonstrate that “toad patrol” schemes, the earliest and largest examples of conservation action for amphibians, can produce robust datasets for trend estimation but require long-term data and adequate analysis, and we urge other countries to use such existing datasets in similar ways. The timing and similarity of the toad declines in both countries suggests a potential commonality of causes, but the exact reasons for the declines remain currently unknown. The recent declines of common species (e.g., birds and butterflies [<xref ref-type="bibr" rid="pone.0161943.ref007">7</xref>,<xref ref-type="bibr" rid="pone.0161943.ref009">9</xref>]) in Western Europe could be explained by the fact that common species occupy areas of land mostly outside of protected areas, including for the common toad, farmland and semi-urban areas. Their declines could be linked to the general deterioration and fragmentation of the quality of the environment on a landscape scale and which cannot be offset by smaller improvements elsewhere, such as in well managed reserves [<xref ref-type="bibr" rid="pone.0161943.ref002">2</xref>, <xref ref-type="bibr" rid="pone.0161943.ref059">59</xref>]. Thus, the spatial scale at which declines of common species are observed suggests a large-scale deterioration of environmental quality.</p>
<p>While significant conservation improvements have recently been achieved for some endangered species [<xref ref-type="bibr" rid="pone.0161943.ref059">59</xref>], common species, including amphibians, are still rapidly declining in Europe, largely unnoticed due to lack of resources for monitoring and despite the fact that such species have a disproportionate impact in providing ecosystem function and structure. Although conservation goals have moved towards a more wide-encompassing approach that incorporates ecosystem goods and services [<xref ref-type="bibr" rid="pone.0161943.ref001">1</xref>], this requires a shift in conservation practice that makes it clear that it is not sufficient to protect habitats of rare specialists. Conservation efforts need to focus more on generalist widespread and common species and the countryside as a whole if system function and resilience are to be maintained.</p>
</sec>
<sec id="sec012">
<title>Supporting Information</title>
<supplementary-material id="pone.0161943.s001" mimetype="text/plain" position="float" xlink:href="info:doi/10.1371/journal.pone.0161943.s001" xlink:type="simple">
<label>S1 File</label>
<caption>
<title>Common toad time series data from Switzerland.</title>
<p>The file contains the raw numbers of toads that were counted.</p>
<p>(TXT)</p>
</caption>
</supplementary-material>
<supplementary-material id="pone.0161943.s002" mimetype="text/plain" position="float" xlink:href="info:doi/10.1371/journal.pone.0161943.s002" xlink:type="simple">
<label>S2 File</label>
<caption>
<title>Common frog time series data from Switzerland.</title>
<p>The file contains the raw numbers of toads that were counted.</p>
<p>(TXT)</p>
</caption>
</supplementary-material>
<supplementary-material id="pone.0161943.s003" mimetype="text/plain" position="float" xlink:href="info:doi/10.1371/journal.pone.0161943.s003" xlink:type="simple">
<label>S3 File</label>
<caption>
<title>Common toad time series data from the UK.</title>
<p>The file contains the raw numbers of toads that were counted.</p>
<p>(TXT)</p>
</caption>
</supplementary-material>
</sec>
</body>
<back>
<ack>
<p>This analysis would not be possible without the thousands of dedicated volunteers who have tirelessly given their time for toad patrols, data collection and submission over the last 30 or more years. In the UK, Froglife was supported by a range of NGOs including WWF-UK and government bodies, including the Department of Transport. County and local Amphibian and Reptile Groups (ARGs) as well as some Wildlife Trusts have supported these efforts over the years. We are grateful to Tom Langton for developing and promoting Toads on Roads in the UK since its inception as a national project in 1984. Chris Monk, John Heaser and others have greatly contributed as regional patrol coordinators. Natural England has supported Froglife on amphibian road research. In Switzerland, the Swiss Federal Office of the Environment supports KARCH, the Swiss Amphibian and Reptile Conservation Program, which allowed collection and maintenance of all the Swiss data. SP is supported by a grant from Esmée Fairbairn Foundation. We thank Richard Chandler and Marc Kéry for help with help with the statistical analysis of the data and Silvia Zumbach and three anonymous reviewers for comments on the manuscript.</p>
</ack>
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