| Test |
Duration |
Result |
| testCreateDbSnpCustomFields[0]([VC testing @ 1:10177 Q. of type=INDEL alleles=[A*, AC] attr={} GT=[] filters=, 1, byFrequency;by1000genomes) |
0.007s |
passed |
| testCreateDbSnpCustomFields[1]([VC testing @ 1:10352 Q. of type=INDEL alleles=[T*, TA] attr={} GT=[] filters=, 2, byFrequency;by1000genomes) |
0.005s |
passed |
| testCreationOfCustomCountFields[0]([VC foo @ 3:1000000 Q. of type=SNP alleles=[A*, T] attr={} GT=[[N1 A*/T AD 20,0],[T1 A*/T AD 10,2 {AF=0.166}]] filters=, [Tumor: T1, Normal: N1], {T=[A, T, 2, 10, 0, 20, 0.166]}) |
0.001s |
passed |
| testCreationOfCustomCountFields[1]([VC foo @ 3:1000000 Q. of type=SNP alleles=[A*, T] attr={} GT=[[T1 A*/T AD 10,2 {AF=0.166}]] filters=, [Tumor: T1, Normal: ], {T=[__UNKNOWN__, __UNKNOWN__, 2, 10, , , 0.166]}) |
0s |
passed |
| testCreationOfCustomCountFields[2]([VC foo @ 3:1000000 Q. of type=MIXED alleles=[A*, AT, T] attr={} GT=[[N1 A*/AT/T AD 20,0,1],[T1 A*/AT/T AD 10,2,4 {AF=0.166,0.32}]] filters=, [Tumor: T1, Normal: N1], {T=[A, T, 2, 10, 0, 20, 0.166], AT=[A, T, 4, 10, 1, 20, 0.32]}) |
0s |
passed |
| testCreationOfCustomCountFields[3]([VC foo @ 3:1000000 Q. of type=MIXED alleles=[A*, AT, T] attr={} GT=[[GERMLINE1 A*/AT/T AD 10,2,4 {AF=0.166,0.32}],[GERMLINE2 A*/AT/T AD 20,0,1]] filters=, [], {T=[__UNKNOWN__, __UNKNOWN__, , , , , ], AT=[__UNKNOWN__, __UNKNOWN__, , , , , ]}) |
0s |
passed |
| testDummyOnlyCustomDbSNPField |
0s |
passed |