| Test |
Duration |
Result |
| testGetAlignmentSignatureBasicType[0](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000000:tig00000, [1_417_chr7:128653321-128653737_+_417M_60_0_417_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, NORMAL) |
0s |
passed |
| testGetAlignmentSignatureBasicType[0](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000000:tig00000, []), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0s |
passed |
| testGetAlignmentSignatureBasicType[10](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000047:tig00001, [1_604_chr1:1427471-1428077_+_562M3D42M1717S_60_6_-1_O, 727_2321_chr1:1425870-1427464_-_726S1595M_60_1_1590_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0s |
passed |
| testGetAlignmentSignatureBasicType[10](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000409:tig00002, [1_832_chr1:19932932-19933763_-_832M1491S_60_2_-1_O, 1047_1114_chr7:355947-356014_-_1046S68M1209S_60_5_-1_O, 1144_2323_chr1:19931769-19932945_-_1143S52M3I1125M_60_11_1118_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, COMPLEX) |
0s |
passed |
| testGetAlignmentSignatureBasicType[11](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000000:tig00000, []), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, UNKNOWN) |
0s |
passed |
| testGetAlignmentSignatureBasicType[11](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000409:tig00002, [1_832_chr1:19932932-19933763_-_832M1491S_60_2_-1_O, 1047_1114_chr7:355947-356014_-_1046S68M1209S_60_5_-1_O, 1144_2323_chr1:19931769-19932945_-_1143S52M3I1125M_60_11_1118_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0s |
passed |
| testGetAlignmentSignatureBasicType[12](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000008:tig00000, [1_672_chr3:198124752-198125423_+_672M_60_4_652_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=true, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, UNKNOWN) |
0s |
passed |
| testGetAlignmentSignatureBasicType[13](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000008:tig00000, [1_672_chr3_KI270784v1_alt:110136-110807_-_672M_26_0_672_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=true, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, UNKNOWN) |
0s |
passed |
| testGetAlignmentSignatureBasicType[14](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000008:tig00000, [1_839_chrUn_JTFH01001343v1_decoy:163-999_-_347M1D157M3I332M_60_12_760_O]), insertionMappings=[1_761_chr4:189976910-189977654_+_52M6I335M2I104M3I18M2I140M3I96M78S_37_54_459_O], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, UNKNOWN) |
0s |
passed |
| testGetAlignmentSignatureBasicType[15](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000128:tig00003, [1_1434_chr1:3174861-3176298_+_1123M4I169M8D138M54S_60_14_1376_O, 1407_1488_chr1:3176048-3176129_+_1406S82M_60_1_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, UNKNOWN) |
0s |
passed |
| testGetAlignmentSignatureBasicType[16](AssemblyContigWithFineTunedAlignments{sourceTig=(asm033434:tig00001, [1_856_chrX:16522926-16523781_-_856M851S_60_0_-1_O, 733_1707_chrX:16522928-16523902_-_732S975M_60_0_975_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, UNKNOWN) |
0s |
passed |
| testGetAlignmentSignatureBasicType[17](AssemblyContigWithFineTunedAlignments{sourceTig=(asm033505:tig00005, [1_372_chrX:27013532-27013907_-_326M4D46M372S_60_6_-1_O, 257_744_chrX:27013053-27013545_+_256S63M4D230M1I102M2D92M_60_19_372_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, UNKNOWN) |
0s |
passed |
| testGetAlignmentSignatureBasicType[18](AssemblyContigWithFineTunedAlignments{sourceTig=(asm033796:tig00000, [1_1146_chrX:66097492-66098635_-_1046M2I98M244S_60_6_1106_O, 1137_1220_chrX:66097492-66097575_-_1136S84M170S_56_3_-1_O, 1192_1251_chrX:66097499-66097558_-_1191S60M139S_60_2_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, UNKNOWN) |
0s |
passed |
| testGetAlignmentSignatureBasicType[19](AssemblyContigWithFineTunedAlignments{sourceTig=(asm033751:tig00029, [1_717_chr5:46783745-46784461_-_276M1I126M1D314M410S_37_58_405_O, 806_979_chr12:37283830-37284003_-_805S174M148S_37_13_-1_O, 921_1127_chr12:37316333-37316539_-_920S207M_37_19_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, UNKNOWN) |
0s |
passed |
| testGetAlignmentSignatureBasicType[1](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000000:tig00000, [1_417_chr7:128653321-128653737_+_417M_60_0_417_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0s |
passed |
| testGetAlignmentSignatureBasicType[1](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000021:tig00001, [1_1947_chr1:1039759-1041716_+_1343M11D604M400S_60_15_1900_O, 1914_2347_chr1:1041824-1042257_+_1913S434M_60_2_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, SIMPLE_CHIMERA) |
0s |
passed |
| testGetAlignmentSignatureBasicType[20](AssemblyContigWithFineTunedAlignments{sourceTig=(asm025906:tig00004, [217_341_chr15:78662854-78662978_+_216S125M407S_60_11_-1_O, 397_463_chr9:11803145-11803211_-_396S67M285S_0_2_-1_O, 504_539_chr1:36282390-36282425_-_503S36M209S_60_0_-1_O, 531_586_chr12:22550783-22550838_-_530S56M162S_60_0_-1_O, 560_748_chr15:91048534-91048722_-_559S189M_60_2_179_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, UNKNOWN) |
0s |
passed |
| testGetAlignmentSignatureBasicType[21](AssemblyContigWithFineTunedAlignments{sourceTig=(asm008278:tig00002, [1_296_chr4:102408175-102408470_-_296M1061S_60_1_-1_O, 211_621_chr4:102408175-102408585_-_210H411M736H_60_1_406_O, 639_1062_chr4:102410693-102411116_-_638S424M295S_60_2_-1_O, 1016_1357_chr4:102409920-102410261_-_1015S342M_60_27_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, UNKNOWN) |
0s |
passed |
| testGetAlignmentSignatureBasicType[22](AssemblyContigWithFineTunedAlignments{sourceTig=(asm022207:tig00002, [1_581_chr12:76122005-76122620_-_158M15D268M20D155M880S_60_39_494_O, 534_656_chr12:76122083-76122207_-_533S92M2D31M805S_19_3_-1_O, 637_691_chr12:76122327-76122381_-_636S55M770S_60_3_-1_O, 689_745_chrUn_JTFH01001681v1_decoy:82-138_-_688S57M716S_9_1_-1_O, 690_751_chr20:58949681-58949742_-_689S62M710S_0_3_-1_O, 863_1104_chr12:76121096-76121373_+_862S24M4D37M17D41M20D40M2I71M3I24M357S_3_51_-1_O, 1007_1420_chr12:76120936-76121385_+_1006S108M4D34M4D34M4D34M4D15M1D19M4D34M4D34M4D34M4D34M3D34M41S_2_52_-1_O, 1389_1461_chr12:76122319-76122395_-_1388S32M4D41M_17_6_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, UNKNOWN) |
0s |
passed |
| testGetAlignmentSignatureBasicType[2](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000021:tig00001, [1_1947_chr1:1039759-1041716_+_1343M11D604M400S_60_15_1900_O, 1914_2347_chr1:1041824-1042257_+_1913S434M_60_2_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0s |
passed |
| testGetAlignmentSignatureBasicType[2](AssemblyContigWithFineTunedAlignments{sourceTig=(asm021002:tig00000, [1_128_chr13:28584682-28584809_+_128M1603S_60_0_-1_O, 1134_1731_chr13:28584810-28585407_+_1133S598M_60_1_593_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, SIMPLE_CHIMERA) |
0s |
passed |
| testGetAlignmentSignatureBasicType[3](AssemblyContigWithFineTunedAlignments{sourceTig=(asm021002:tig00000, [1_128_chr13:28584682-28584809_+_128M1603S_60_0_-1_O, 1134_1731_chr13:28584810-28585407_+_1133S598M_60_1_593_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0s |
passed |
| testGetAlignmentSignatureBasicType[3](AssemblyContigWithFineTunedAlignments{sourceTig=(asm030976:tig00000, [1_485_chrX:124128293-124128777_+_485M1236S_60_4_-1_O, 487_1721_chrX:124128553-124129789_+_486S26M1D126M1D1083M_60_14_1141_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, SIMPLE_CHIMERA) |
0.001s |
passed |
| testGetAlignmentSignatureBasicType[4](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000629:tig00002, [1_374_chr1:34802338-34802711_-_374M1104S_60_0_-1_O, 265_1478_chr1:34801124-34802337_-_264S1214M_60_1_1209_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, SIMPLE_CHIMERA) |
0s |
passed |
| testGetAlignmentSignatureBasicType[4](AssemblyContigWithFineTunedAlignments{sourceTig=(asm030976:tig00000, [1_485_chrX:124128293-124128777_+_485M1236S_60_4_-1_O, 487_1721_chrX:124128553-124129789_+_486S26M1D126M1D1083M_60_14_1141_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0s |
passed |
| testGetAlignmentSignatureBasicType[5](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000629:tig00002, [1_374_chr1:34802338-34802711_-_374M1104S_60_0_-1_O, 265_1478_chr1:34801124-34802337_-_264S1214M_60_1_1209_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0s |
passed |
| testGetAlignmentSignatureBasicType[5](AssemblyContigWithFineTunedAlignments{sourceTig=(asm031149:tig00001, [1_976_chrX:151072096-151073056_+_628M10I48M4I24M2I98M2D72M1D54M2I34M1018H_60_44_726_O, 859_1994_chrX:151072684-151073815_+_858S54M2I28M4I94M4D97M9D36M9I362M2I448M_60_69_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, SIMPLE_CHIMERA) |
0s |
passed |
| testGetAlignmentSignatureBasicType[6](AssemblyContigWithFineTunedAlignments{sourceTig=(asm030197:tig00003, [1_1119_chrX:1611957-1613072_-_118M4I668M1D329M410S_60_11_-1_O, 718_1529_chrX:1611145-1611960_-_717H28M1I44M5D739M_60_36_623_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, SIMPLE_CHIMERA) |
0s |
passed |
| testGetAlignmentSignatureBasicType[6](AssemblyContigWithFineTunedAlignments{sourceTig=(asm031149:tig00001, [1_976_chrX:151072096-151073056_+_628M10I48M4I24M2I98M2D72M1D54M2I34M1018H_60_44_726_O, 859_1994_chrX:151072684-151073815_+_858S54M2I28M4I94M4D97M9D36M9I362M2I448M_60_69_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0s |
passed |
| testGetAlignmentSignatureBasicType[7](AssemblyContigWithFineTunedAlignments{sourceTig=(asm022624:tig00004, [1_653_chrX:28601137-28601789_-_653M179S_60_1_648_O, 589_832_chrX:134477298-134477541_+_588S244M_60_2_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, SIMPLE_CHIMERA) |
0s |
passed |
| testGetAlignmentSignatureBasicType[7](AssemblyContigWithFineTunedAlignments{sourceTig=(asm030197:tig00003, [1_1119_chrX:1611957-1613072_-_118M4I668M1D329M410S_60_11_-1_O, 718_1529_chrX:1611145-1611960_-_717H28M1I44M5D739M_60_36_623_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0s |
passed |
| testGetAlignmentSignatureBasicType[8](AssemblyContigWithFineTunedAlignments{sourceTig=(asm009941:tig00003, [7_195_chr1:10109-10279_+_6S86M14I55M4I30M1197S_60_21_-1_O, 117_1392_chr6:147908-149183_+_116S1276M_60_0_1276_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, SIMPLE_CHIMERA) |
0s |
passed |
| testGetAlignmentSignatureBasicType[8](AssemblyContigWithFineTunedAlignments{sourceTig=(asm022624:tig00004, [1_653_chrX:28601137-28601789_-_653M179S_60_1_648_O, 589_832_chrX:134477298-134477541_+_588S244M_60_2_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0s |
passed |
| testGetAlignmentSignatureBasicType[9](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000047:tig00001, [1_604_chr1:1427471-1428077_+_562M3D42M1717S_60_6_-1_O, 727_2321_chr1:1425870-1427464_-_726S1595M_60_1_1590_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, SIMPLE_CHIMERA) |
0s |
passed |
| testGetAlignmentSignatureBasicType[9](AssemblyContigWithFineTunedAlignments{sourceTig=(asm009941:tig00003, [7_195_chr1:10109-10279_+_6S86M14I55M4I30M1197S_60_21_-1_O, 117_1392_chr6:147908-149183_+_116S1276M_60_0_1276_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0s |
passed |
| testGetReasonForAlignmentClassificationFailure[0](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000128:tig00003, [1_1434_chr1:3174861-3176298_+_1123M4I169M8D138M54S_60_14_1376_O, 1407_1488_chr1:3176048-3176129_+_1406S82M_60_1_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, INCOMPLETE) |
0s |
passed |
| testGetReasonForAlignmentClassificationFailure[10](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000008:tig00000, [1_839_chrUn_JTFH01001343v1_decoy:163-999_-_347M1D157M3I332M_60_12_760_O]), insertionMappings=[1_761_chr4:189976910-189977654_+_52M6I335M2I104M3I18M2I140M3I96M78S_37_54_459_O], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, UNINFORMATIVE) |
0s |
passed |
| testGetReasonForAlignmentClassificationFailure[1](AssemblyContigWithFineTunedAlignments{sourceTig=(asm033434:tig00001, [1_856_chrX:16522926-16523781_-_856M851S_60_0_-1_O, 733_1707_chrX:16522928-16523902_-_732S975M_60_0_975_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, INCOMPLETE) |
0s |
passed |
| testGetReasonForAlignmentClassificationFailure[2](AssemblyContigWithFineTunedAlignments{sourceTig=(asm033505:tig00005, [1_372_chrX:27013532-27013907_-_326M4D46M372S_60_6_-1_O, 257_744_chrX:27013053-27013545_+_256S63M4D230M1I102M2D92M_60_19_372_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, INCOMPLETE) |
0s |
passed |
| testGetReasonForAlignmentClassificationFailure[3](AssemblyContigWithFineTunedAlignments{sourceTig=(asm033796:tig00000, [1_1146_chrX:66097492-66098635_-_1046M2I98M244S_60_6_1106_O, 1137_1220_chrX:66097492-66097575_-_1136S84M170S_56_3_-1_O, 1192_1251_chrX:66097499-66097558_-_1191S60M139S_60_2_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, INCOMPLETE) |
0s |
passed |
| testGetReasonForAlignmentClassificationFailure[4](AssemblyContigWithFineTunedAlignments{sourceTig=(asm033751:tig00029, [1_717_chr5:46783745-46784461_-_276M1I126M1D314M410S_37_58_405_O, 806_979_chr12:37283830-37284003_-_805S174M148S_37_13_-1_O, 921_1127_chr12:37316333-37316539_-_920S207M_37_19_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, INCOMPLETE) |
0s |
passed |
| testGetReasonForAlignmentClassificationFailure[5](AssemblyContigWithFineTunedAlignments{sourceTig=(asm025906:tig00004, [217_341_chr15:78662854-78662978_+_216S125M407S_60_11_-1_O, 397_463_chr9:11803145-11803211_-_396S67M285S_0_2_-1_O, 504_539_chr1:36282390-36282425_-_503S36M209S_60_0_-1_O, 531_586_chr12:22550783-22550838_-_530S56M162S_60_0_-1_O, 560_748_chr15:91048534-91048722_-_559S189M_60_2_179_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, INCOMPLETE) |
0s |
passed |
| testGetReasonForAlignmentClassificationFailure[6](AssemblyContigWithFineTunedAlignments{sourceTig=(asm008278:tig00002, [1_296_chr4:102408175-102408470_-_296M1061S_60_1_-1_O, 211_621_chr4:102408175-102408585_-_210H411M736H_60_1_406_O, 639_1062_chr4:102410693-102411116_-_638S424M295S_60_2_-1_O, 1016_1357_chr4:102409920-102410261_-_1015S342M_60_27_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, INCOMPLETE) |
0s |
passed |
| testGetReasonForAlignmentClassificationFailure[7](AssemblyContigWithFineTunedAlignments{sourceTig=(asm022207:tig00002, [1_581_chr12:76122005-76122620_-_158M15D268M20D155M880S_60_39_494_O, 534_656_chr12:76122083-76122207_-_533S92M2D31M805S_19_3_-1_O, 637_691_chr12:76122327-76122381_-_636S55M770S_60_3_-1_O, 689_745_chrUn_JTFH01001681v1_decoy:82-138_-_688S57M716S_9_1_-1_O, 690_751_chr20:58949681-58949742_-_689S62M710S_0_3_-1_O, 863_1104_chr12:76121096-76121373_+_862S24M4D37M17D41M20D40M2I71M3I24M357S_3_51_-1_O, 1007_1420_chr12:76120936-76121385_+_1006S108M4D34M4D34M4D34M4D15M1D19M4D34M4D34M4D34M4D34M3D34M41S_2_52_-1_O, 1389_1461_chr12:76122319-76122395_-_1388S32M4D41M_17_6_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, INCOMPLETE) |
0s |
passed |
| testGetReasonForAlignmentClassificationFailure[8](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000008:tig00000, [1_672_chr3:198124752-198125423_+_672M_60_4_652_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=true, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, AMBIGUOUS) |
0s |
passed |
| testGetReasonForAlignmentClassificationFailure[9](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000008:tig00000, [1_672_chr3_KI270784v1_alt:110136-110807_-_672M_26_0_672_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=true, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, AMBIGUOUS) |
0.001s |
passed |
| testHasChimericAlignments[0](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000000:tig00000, []), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, false) |
0.001s |
passed |
| testHasChimericAlignments[10](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000047:tig00001, [1_604_chr1:1427471-1428077_+_562M3D42M1717S_60_6_-1_O, 727_2321_chr1:1425870-1427464_-_726S1595M_60_1_1590_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, true) |
0s |
passed |
| testHasChimericAlignments[11](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000409:tig00002, [1_832_chr1:19932932-19933763_-_832M1491S_60_2_-1_O, 1047_1114_chr7:355947-356014_-_1046S68M1209S_60_5_-1_O, 1144_2323_chr1:19931769-19932945_-_1143S52M3I1125M_60_11_1118_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, true) |
0s |
passed |
| testHasChimericAlignments[1](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000000:tig00000, [1_417_chr7:128653321-128653737_+_417M_60_0_417_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, false) |
0s |
passed |
| testHasChimericAlignments[2](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000021:tig00001, [1_1947_chr1:1039759-1041716_+_1343M11D604M400S_60_15_1900_O, 1914_2347_chr1:1041824-1042257_+_1913S434M_60_2_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, true) |
0s |
passed |
| testHasChimericAlignments[3](AssemblyContigWithFineTunedAlignments{sourceTig=(asm021002:tig00000, [1_128_chr13:28584682-28584809_+_128M1603S_60_0_-1_O, 1134_1731_chr13:28584810-28585407_+_1133S598M_60_1_593_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, true) |
0s |
passed |
| testHasChimericAlignments[4](AssemblyContigWithFineTunedAlignments{sourceTig=(asm030976:tig00000, [1_485_chrX:124128293-124128777_+_485M1236S_60_4_-1_O, 487_1721_chrX:124128553-124129789_+_486S26M1D126M1D1083M_60_14_1141_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, true) |
0s |
passed |
| testHasChimericAlignments[5](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000629:tig00002, [1_374_chr1:34802338-34802711_-_374M1104S_60_0_-1_O, 265_1478_chr1:34801124-34802337_-_264S1214M_60_1_1209_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, true) |
0s |
passed |
| testHasChimericAlignments[6](AssemblyContigWithFineTunedAlignments{sourceTig=(asm031149:tig00001, [1_976_chrX:151072096-151073056_+_628M10I48M4I24M2I98M2D72M1D54M2I34M1018H_60_44_726_O, 859_1994_chrX:151072684-151073815_+_858S54M2I28M4I94M4D97M9D36M9I362M2I448M_60_69_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, true) |
0s |
passed |
| testHasChimericAlignments[7](AssemblyContigWithFineTunedAlignments{sourceTig=(asm030197:tig00003, [1_1119_chrX:1611957-1613072_-_118M4I668M1D329M410S_60_11_-1_O, 718_1529_chrX:1611145-1611960_-_717H28M1I44M5D739M_60_36_623_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, true) |
0s |
passed |
| testHasChimericAlignments[8](AssemblyContigWithFineTunedAlignments{sourceTig=(asm022624:tig00004, [1_653_chrX:28601137-28601789_-_653M179S_60_1_648_O, 589_832_chrX:134477298-134477541_+_588S244M_60_2_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, true) |
0s |
passed |
| testHasChimericAlignments[9](AssemblyContigWithFineTunedAlignments{sourceTig=(asm009941:tig00003, [7_195_chr1:10109-10279_+_6S86M14I55M4I30M1197S_60_21_-1_O, 117_1392_chr6:147908-149183_+_116S1276M_60_0_1276_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, true) |
0s |
passed |
| testHasIncompletePictureFromMultipleAlignments[0](AssemblyContigWithFineTunedAlignments{sourceTig=(asm033796:tig00000, [1_1146_chrX:66097492-66098635_-_1046M2I98M244S_60_6_1106_O, 1137_1220_chrX:66097492-66097575_-_1136S84M170S_56_3_-1_O, 1192_1251_chrX:66097499-66097558_-_1191S60M139S_60_2_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0s |
passed |
| testHasIncompletePictureFromMultipleAlignments[1](AssemblyContigWithFineTunedAlignments{sourceTig=(asm033751:tig00029, [1_717_chr5:46783745-46784461_-_276M1I126M1D314M410S_37_58_405_O, 806_979_chr12:37283830-37284003_-_805S174M148S_37_13_-1_O, 921_1127_chr12:37316333-37316539_-_920S207M_37_19_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0s |
passed |
| testHasIncompletePictureFromMultipleAlignments[2](AssemblyContigWithFineTunedAlignments{sourceTig=(asm025906:tig00004, [217_341_chr15:78662854-78662978_+_216S125M407S_60_11_-1_O, 397_463_chr9:11803145-11803211_-_396S67M285S_0_2_-1_O, 504_539_chr1:36282390-36282425_-_503S36M209S_60_0_-1_O, 531_586_chr12:22550783-22550838_-_530S56M162S_60_0_-1_O, 560_748_chr15:91048534-91048722_-_559S189M_60_2_179_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0s |
passed |
| testHasIncompletePictureFromMultipleAlignments[3](AssemblyContigWithFineTunedAlignments{sourceTig=(asm008278:tig00002, [1_296_chr4:102408175-102408470_-_296M1061S_60_1_-1_O, 211_621_chr4:102408175-102408585_-_210H411M736H_60_1_406_O, 639_1062_chr4:102410693-102411116_-_638S424M295S_60_2_-1_O, 1016_1357_chr4:102409920-102410261_-_1015S342M_60_27_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0s |
passed |
| testHasIncompletePictureFromMultipleAlignments[4](AssemblyContigWithFineTunedAlignments{sourceTig=(asm022207:tig00002, [1_581_chr12:76122005-76122620_-_158M15D268M20D155M880S_60_39_494_O, 534_656_chr12:76122083-76122207_-_533S92M2D31M805S_19_3_-1_O, 637_691_chr12:76122327-76122381_-_636S55M770S_60_3_-1_O, 689_745_chrUn_JTFH01001681v1_decoy:82-138_-_688S57M716S_9_1_-1_O, 690_751_chr20:58949681-58949742_-_689S62M710S_0_3_-1_O, 863_1104_chr12:76121096-76121373_+_862S24M4D37M17D41M20D40M2I71M3I24M357S_3_51_-1_O, 1007_1420_chr12:76120936-76121385_+_1006S108M4D34M4D34M4D34M4D15M1D19M4D34M4D34M4D34M4D34M3D34M41S_2_52_-1_O, 1389_1461_chr12:76122319-76122395_-_1388S32M4D41M_17_6_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0.001s |
passed |
| testHasIncompletePictureFromTwoAlignments[0](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000128:tig00003, [1_1434_chr1:3174861-3176298_+_1123M4I169M8D138M54S_60_14_1376_O, 1407_1488_chr1:3176048-3176129_+_1406S82M_60_1_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0s |
passed |
| testHasIncompletePictureFromTwoAlignments[1](AssemblyContigWithFineTunedAlignments{sourceTig=(asm033434:tig00001, [1_856_chrX:16522926-16523781_-_856M851S_60_0_-1_O, 733_1707_chrX:16522928-16523902_-_732S975M_60_0_975_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0s |
passed |
| testHasIncompletePictureFromTwoAlignments[2](AssemblyContigWithFineTunedAlignments{sourceTig=(asm033505:tig00005, [1_372_chrX:27013532-27013907_-_326M4D46M372S_60_6_-1_O, 257_744_chrX:27013053-27013545_+_256S63M4D230M1I102M2D92M_60_19_372_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}) |
0s |
passed |
| testHasIncompletePicture[0](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000000:tig00000, []), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, false) |
0s |
passed |
| testHasIncompletePicture[10](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000047:tig00001, [1_604_chr1:1427471-1428077_+_562M3D42M1717S_60_6_-1_O, 727_2321_chr1:1425870-1427464_-_726S1595M_60_1_1590_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, false) |
0s |
passed |
| testHasIncompletePicture[11](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000409:tig00002, [1_832_chr1:19932932-19933763_-_832M1491S_60_2_-1_O, 1047_1114_chr7:355947-356014_-_1046S68M1209S_60_5_-1_O, 1144_2323_chr1:19931769-19932945_-_1143S52M3I1125M_60_11_1118_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, false) |
0s |
passed |
| testHasIncompletePicture[12](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000128:tig00003, [1_1434_chr1:3174861-3176298_+_1123M4I169M8D138M54S_60_14_1376_O, 1407_1488_chr1:3176048-3176129_+_1406S82M_60_1_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, true) |
0s |
passed |
| testHasIncompletePicture[13](AssemblyContigWithFineTunedAlignments{sourceTig=(asm033434:tig00001, [1_856_chrX:16522926-16523781_-_856M851S_60_0_-1_O, 733_1707_chrX:16522928-16523902_-_732S975M_60_0_975_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, true) |
0s |
passed |
| testHasIncompletePicture[14](AssemblyContigWithFineTunedAlignments{sourceTig=(asm033505:tig00005, [1_372_chrX:27013532-27013907_-_326M4D46M372S_60_6_-1_O, 257_744_chrX:27013053-27013545_+_256S63M4D230M1I102M2D92M_60_19_372_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, true) |
0s |
passed |
| testHasIncompletePicture[15](AssemblyContigWithFineTunedAlignments{sourceTig=(asm033796:tig00000, [1_1146_chrX:66097492-66098635_-_1046M2I98M244S_60_6_1106_O, 1137_1220_chrX:66097492-66097575_-_1136S84M170S_56_3_-1_O, 1192_1251_chrX:66097499-66097558_-_1191S60M139S_60_2_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, true) |
0s |
passed |
| testHasIncompletePicture[16](AssemblyContigWithFineTunedAlignments{sourceTig=(asm033751:tig00029, [1_717_chr5:46783745-46784461_-_276M1I126M1D314M410S_37_58_405_O, 806_979_chr12:37283830-37284003_-_805S174M148S_37_13_-1_O, 921_1127_chr12:37316333-37316539_-_920S207M_37_19_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, true) |
0s |
passed |
| testHasIncompletePicture[17](AssemblyContigWithFineTunedAlignments{sourceTig=(asm025906:tig00004, [217_341_chr15:78662854-78662978_+_216S125M407S_60_11_-1_O, 397_463_chr9:11803145-11803211_-_396S67M285S_0_2_-1_O, 504_539_chr1:36282390-36282425_-_503S36M209S_60_0_-1_O, 531_586_chr12:22550783-22550838_-_530S56M162S_60_0_-1_O, 560_748_chr15:91048534-91048722_-_559S189M_60_2_179_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, true) |
0s |
passed |
| testHasIncompletePicture[18](AssemblyContigWithFineTunedAlignments{sourceTig=(asm008278:tig00002, [1_296_chr4:102408175-102408470_-_296M1061S_60_1_-1_O, 211_621_chr4:102408175-102408585_-_210H411M736H_60_1_406_O, 639_1062_chr4:102410693-102411116_-_638S424M295S_60_2_-1_O, 1016_1357_chr4:102409920-102410261_-_1015S342M_60_27_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, true) |
0s |
passed |
| testHasIncompletePicture[19](AssemblyContigWithFineTunedAlignments{sourceTig=(asm022207:tig00002, [1_581_chr12:76122005-76122620_-_158M15D268M20D155M880S_60_39_494_O, 534_656_chr12:76122083-76122207_-_533S92M2D31M805S_19_3_-1_O, 637_691_chr12:76122327-76122381_-_636S55M770S_60_3_-1_O, 689_745_chrUn_JTFH01001681v1_decoy:82-138_-_688S57M716S_9_1_-1_O, 690_751_chr20:58949681-58949742_-_689S62M710S_0_3_-1_O, 863_1104_chr12:76121096-76121373_+_862S24M4D37M17D41M20D40M2I71M3I24M357S_3_51_-1_O, 1007_1420_chr12:76120936-76121385_+_1006S108M4D34M4D34M4D34M4D15M1D19M4D34M4D34M4D34M4D34M3D34M41S_2_52_-1_O, 1389_1461_chr12:76122319-76122395_-_1388S32M4D41M_17_6_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, true) |
0.001s |
passed |
| testHasIncompletePicture[1](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000000:tig00000, [1_417_chr7:128653321-128653737_+_417M_60_0_417_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, false) |
0s |
passed |
| testHasIncompletePicture[2](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000021:tig00001, [1_1947_chr1:1039759-1041716_+_1343M11D604M400S_60_15_1900_O, 1914_2347_chr1:1041824-1042257_+_1913S434M_60_2_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, false) |
0s |
passed |
| testHasIncompletePicture[3](AssemblyContigWithFineTunedAlignments{sourceTig=(asm021002:tig00000, [1_128_chr13:28584682-28584809_+_128M1603S_60_0_-1_O, 1134_1731_chr13:28584810-28585407_+_1133S598M_60_1_593_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, false) |
0s |
passed |
| testHasIncompletePicture[4](AssemblyContigWithFineTunedAlignments{sourceTig=(asm030976:tig00000, [1_485_chrX:124128293-124128777_+_485M1236S_60_4_-1_O, 487_1721_chrX:124128553-124129789_+_486S26M1D126M1D1083M_60_14_1141_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, false) |
0s |
passed |
| testHasIncompletePicture[5](AssemblyContigWithFineTunedAlignments{sourceTig=(asm000629:tig00002, [1_374_chr1:34802338-34802711_-_374M1104S_60_0_-1_O, 265_1478_chr1:34801124-34802337_-_264S1214M_60_1_1209_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, false) |
0s |
passed |
| testHasIncompletePicture[6](AssemblyContigWithFineTunedAlignments{sourceTig=(asm031149:tig00001, [1_976_chrX:151072096-151073056_+_628M10I48M4I24M2I98M2D72M1D54M2I34M1018H_60_44_726_O, 859_1994_chrX:151072684-151073815_+_858S54M2I28M4I94M4D97M9D36M9I362M2I448M_60_69_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, false) |
0s |
passed |
| testHasIncompletePicture[7](AssemblyContigWithFineTunedAlignments{sourceTig=(asm030197:tig00003, [1_1119_chrX:1611957-1613072_-_118M4I668M1D329M410S_60_11_-1_O, 718_1529_chrX:1611145-1611960_-_717H28M1I44M5D739M_60_36_623_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, false) |
0s |
passed |
| testHasIncompletePicture[8](AssemblyContigWithFineTunedAlignments{sourceTig=(asm022624:tig00004, [1_653_chrX:28601137-28601789_-_653M179S_60_1_648_O, 589_832_chrX:134477298-134477541_+_588S244M_60_2_-1_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, false) |
0s |
passed |
| testHasIncompletePicture[9](AssemblyContigWithFineTunedAlignments{sourceTig=(asm009941:tig00003, [7_195_chr1:10109-10279_+_6S86M14I55M4I30M1197S_60_21_-1_O, 117_1392_chr6:147908-149183_+_116S1276M_60_0_1276_O]), insertionMappings=[], hasEquallyGoodAlnConfigurations=false, saTAGForGoodMappingToNonCanonicalChromosome='NONE'}, false) |
0s |
passed |
| testSerializationAndHashCode |
0.001s |
passed |