Class org.broadinstitute.hellbender.tools.walkers.varianteval.util.SnpEffUtilUnitTest

69

tests

0

failures

0

ignored

0.008s

duration

100%

successful

Tests

Test Duration Result
testNonSubTypeSelf[0](GENE, CHROMOSOME) 0s passed
testNonSubTypeSelf[1](UTR_3_PRIME, TRANSCRIPT) 0.001s passed
testNonSubTypeSelf[2](CODON_CHANGE, CDS) 0s passed
testNonSubTypeSelf[3](STOP_GAINED, EXON) 0s passed
testNonSubTypeSelf[4](SYNONYMOUS_START, TRANSCRIPT) 0s passed
testNonSubTypeSelf[5](FRAME_SHIFT, CDS) 0s passed
testNonSubTypeSelf[6](UPSTREAM, INTERGENIC) 0s passed
testNonSubTypeSelf[7](SPLICE_SITE_DONOR, INTRON) 0.001s passed
testNonSubTypeSelf[8](SPLICE_SITE_ACCEPTOR, INTRON) 0s passed
testNonSubTypeSelf[9](STOP_LOST, NON_SYNONYMOUS_CODING) 0s passed
testNonSubType[0](START_GAINED, NON_SYNONYMOUS_CODING) 0s passed
testNonSubType[10](INTRON, NONE) 0s passed
testNonSubType[1](GENE, NONE) 0.001s passed
testNonSubType[2](UTR_3_PRIME, CDS) 0s passed
testNonSubType[3](CODON_CHANGE, REGULATION) 0s passed
testNonSubType[4](DOWNSTREAM, REGULATION) 0s passed
testNonSubType[5](SPLICE_SITE_ACCEPTOR, EXON) 0.001s passed
testNonSubType[6](START_GAINED, SYNONYMOUS_START) 0s passed
testNonSubType[7](NON_SYNONYMOUS_CODING, DOWNSTREAM) 0s passed
testNonSubType[8](CODON_DELETION, INTRON) 0s passed
testNonSubType[9](UTR_5_PRIME, EXON_DELETED) 0.001s passed
testSubTypeSelf[0](SPLICE_SITE_ACCEPTOR, SPLICE_SITE_ACCEPTOR) 0s passed
testSubTypeSelf[10](CODON_CHANGE_PLUS_CODON_INSERTION, CODON_CHANGE_PLUS_CODON_INSERTION) 0s passed
testSubTypeSelf[11](CODON_DELETION, CODON_DELETION) 0s passed
testSubTypeSelf[12](CODON_CHANGE_PLUS_CODON_DELETION, CODON_CHANGE_PLUS_CODON_DELETION) 0s passed
testSubTypeSelf[13](UTR_5_DELETED, UTR_5_DELETED) 0s passed
testSubTypeSelf[14](UTR_3_DELETED, UTR_3_DELETED) 0s passed
testSubTypeSelf[15](SYNONYMOUS_START, SYNONYMOUS_START) 0s passed
testSubTypeSelf[16](NON_SYNONYMOUS_START, NON_SYNONYMOUS_START) 0s passed
testSubTypeSelf[17](START_GAINED, START_GAINED) 0s passed
testSubTypeSelf[18](SYNONYMOUS_CODING, SYNONYMOUS_CODING) 0s passed
testSubTypeSelf[19](SYNONYMOUS_STOP, SYNONYMOUS_STOP) 0s passed
testSubTypeSelf[1](SPLICE_SITE_DONOR, SPLICE_SITE_DONOR) 0s passed
testSubTypeSelf[20](NON_SYNONYMOUS_STOP, NON_SYNONYMOUS_STOP) 0s passed
testSubTypeSelf[21](NONE, NONE) 0s passed
testSubTypeSelf[22](CHROMOSOME, CHROMOSOME) 0s passed
testSubTypeSelf[23](CUSTOM, CUSTOM) 0s passed
testSubTypeSelf[24](CDS, CDS) 0.001s passed
testSubTypeSelf[25](GENE, GENE) 0s passed
testSubTypeSelf[26](TRANSCRIPT, TRANSCRIPT) 0s passed
testSubTypeSelf[27](EXON, EXON) 0.001s passed
testSubTypeSelf[28](INTRON_CONSERVED, INTRON_CONSERVED) 0s passed
testSubTypeSelf[29](UTR_5_PRIME, UTR_5_PRIME) 0s passed
testSubTypeSelf[2](START_LOST, START_LOST) 0s passed
testSubTypeSelf[30](UTR_3_PRIME, UTR_3_PRIME) 0s passed
testSubTypeSelf[31](DOWNSTREAM, DOWNSTREAM) 0s passed
testSubTypeSelf[32](INTRAGENIC, INTRAGENIC) 0s passed
testSubTypeSelf[33](INTERGENIC, INTERGENIC) 0s passed
testSubTypeSelf[34](INTERGENIC_CONSERVED, INTERGENIC_CONSERVED) 0s passed
testSubTypeSelf[35](UPSTREAM, UPSTREAM) 0s passed
testSubTypeSelf[36](REGULATION, REGULATION) 0s passed
testSubTypeSelf[37](INTRON, INTRON) 0.001s passed
testSubTypeSelf[3](EXON_DELETED, EXON_DELETED) 0s passed
testSubTypeSelf[4](FRAME_SHIFT, FRAME_SHIFT) 0s passed
testSubTypeSelf[5](STOP_GAINED, STOP_GAINED) 0s passed
testSubTypeSelf[6](STOP_LOST, STOP_LOST) 0s passed
testSubTypeSelf[7](NON_SYNONYMOUS_CODING, NON_SYNONYMOUS_CODING) 0s passed
testSubTypeSelf[8](CODON_CHANGE, CODON_CHANGE) 0s passed
testSubTypeSelf[9](CODON_INSERTION, CODON_INSERTION) 0s passed
testSubType[0](GENE, CHROMOSOME) 0s passed
testSubType[1](UTR_3_PRIME, TRANSCRIPT) 0s passed
testSubType[2](CODON_CHANGE, CDS) 0s passed
testSubType[3](STOP_GAINED, EXON) 0s passed
testSubType[4](SYNONYMOUS_START, TRANSCRIPT) 0s passed
testSubType[5](FRAME_SHIFT, CDS) 0s passed
testSubType[6](UPSTREAM, INTERGENIC) 0s passed
testSubType[7](SPLICE_SITE_DONOR, INTRON) 0s passed
testSubType[8](SPLICE_SITE_ACCEPTOR, INTRON) 0s passed
testSubType[9](STOP_LOST, NON_SYNONYMOUS_CODING) 0s passed