Class org.broadinstitute.hellbender.utils.QualityUtilsUnitTest

303

tests

0

failures

0

ignored

0.111s

duration

100%

successful

Tests

Test Duration Result
testBoundingDefault 0.003s passed
testBoundingWithMax 0.006s passed
testLogProbToPhred 0s passed
testMyData[0](0, 1.0) 0.004s passed
testMyData[100](100, 1.0E-10) 0.001s passed
testMyData[101](101, 7.943282347242822E-11) 0s passed
testMyData[102](102, 6.309573444801942E-11) 0.001s passed
testMyData[103](103, 5.011872336272715E-11) 0s passed
testMyData[104](104, 3.9810717055349695E-11) 0s passed
testMyData[105](105, 3.1622776601683794E-11) 0s passed
testMyData[106](106, 2.5118864315095823E-11) 0.001s passed
testMyData[107](107, 1.9952623149688828E-11) 0.001s passed
testMyData[108](108, 1.5848931924611107E-11) 0s passed
testMyData[109](109, 1.2589254117941662E-11) 0.001s passed
testMyData[10](10, 0.1) 0s passed
testMyData[110](110, 1.0E-11) 0s passed
testMyData[111](111, 7.943282347242821E-12) 0.001s passed
testMyData[112](112, 6.309573444801943E-12) 0s passed
testMyData[113](113, 5.011872336272715E-12) 0.001s passed
testMyData[114](114, 3.9810717055349695E-12) 0s passed
testMyData[115](115, 3.1622776601683794E-12) 0.001s passed
testMyData[116](116, 2.5118864315095823E-12) 0s passed
testMyData[117](117, 1.9952623149688827E-12) 0.001s passed
testMyData[118](118, 1.584893192461111E-12) 0s passed
testMyData[119](119, 1.258925411794166E-12) 0s passed
testMyData[11](11, 0.07943282347242814) 0s passed
testMyData[120](120, 1.0E-12) 0s passed
testMyData[121](121, 7.943282347242822E-13) 0.001s passed
testMyData[122](122, 6.309573444801942E-13) 0.001s passed
testMyData[123](123, 5.011872336272715E-13) 0s passed
testMyData[124](124, 3.981071705534969E-13) 0.001s passed
testMyData[125](125, 3.162277660168379E-13) 0s passed
testMyData[126](126, 2.511886431509582E-13) 0s passed
testMyData[127](127, 1.9952623149688827E-13) 0s passed
testMyData[128](-128, 1.584893192461111E-13) 0s passed
testMyData[129](-127, 1.2589254117941663E-13) 0.001s passed
testMyData[12](12, 0.06309573444801933) 0s passed
testMyData[130](-126, 1.0E-13) 0s passed
testMyData[131](-125, 7.943282347242822E-14) 0s passed
testMyData[132](-124, 6.309573444801943E-14) 0s passed
testMyData[133](-123, 5.0118723362727144E-14) 0s passed
testMyData[134](-122, 3.9810717055349693E-14) 0.001s passed
testMyData[135](-121, 3.1622776601683796E-14) 0s passed
testMyData[136](-120, 2.5118864315095823E-14) 0s passed
testMyData[137](-119, 1.9952623149688828E-14) 0s passed
testMyData[138](-118, 1.584893192461111E-14) 0s passed
testMyData[139](-117, 1.2589254117941662E-14) 0.001s passed
testMyData[13](13, 0.05011872336272722) 0s passed
testMyData[140](-116, 1.0E-14) 0s passed
testMyData[141](-115, 7.943282347242822E-15) 0s passed
testMyData[142](-114, 6.309573444801943E-15) 0s passed
testMyData[143](-113, 5.0118723362727146E-15) 0s passed
testMyData[144](-112, 3.9810717055349695E-15) 0.001s passed
testMyData[145](-111, 3.1622776601683794E-15) 0s passed
testMyData[146](-110, 2.511886431509582E-15) 0s passed
testMyData[147](-109, 1.995262314968883E-15) 0.001s passed
testMyData[148](-108, 1.584893192461111E-15) 0s passed
testMyData[149](-107, 1.2589254117941663E-15) 0.001s passed
testMyData[14](14, 0.039810717055349734) 0s passed
testMyData[150](-106, 1.0E-15) 0s passed
testMyData[151](-105, 7.943282347242821E-16) 0s passed
testMyData[152](-104, 6.309573444801943E-16) 0.001s passed
testMyData[153](-103, 5.011872336272715E-16) 0s passed
testMyData[154](-102, 3.9810717055349695E-16) 0s passed
testMyData[155](-101, 3.1622776601683793E-16) 0s passed
testMyData[156](-100, 2.511886431509582E-16) 0s passed
testMyData[157](-99, 1.995262314968883E-16) 0.001s passed
testMyData[158](-98, 1.5848931924611109E-16) 0s passed
testMyData[159](-97, 1.2589254117941662E-16) 0s passed
testMyData[15](15, 0.03162277660168379) 0s passed
testMyData[160](-96, 1.0E-16) 0s passed
testMyData[161](-95, 7.943282347242789E-17) 0s passed
testMyData[162](-94, 6.309573444801943E-17) 0.001s passed
testMyData[163](-93, 5.0118723362727144E-17) 0s passed
testMyData[164](-92, 3.9810717055349855E-17) 0.001s passed
testMyData[165](-91, 3.1622776601683796E-17) 0s passed
testMyData[166](-90, 2.5118864315095718E-17) 0s passed
testMyData[167](-89, 1.9952623149688827E-17) 0s passed
testMyData[168](-88, 1.584893192461111E-17) 0.001s passed
testMyData[169](-87, 1.2589254117941713E-17) 0s passed
testMyData[16](16, 0.025118864315095794) 0.001s passed
testMyData[170](-86, 1.0E-17) 0s passed
testMyData[171](-85, 7.94328234724279E-18) 0.001s passed
testMyData[172](-84, 6.309573444801943E-18) 0s passed
testMyData[173](-83, 5.011872336272715E-18) 0s passed
testMyData[174](-82, 3.981071705534985E-18) 0.001s passed
testMyData[175](-81, 3.1622776601683795E-18) 0s passed
testMyData[176](-80, 2.5118864315095718E-18) 0s passed
testMyData[177](-79, 1.995262314968883E-18) 0.001s passed
testMyData[178](-78, 1.5848931924611109E-18) 0s passed
testMyData[179](-77, 1.2589254117941713E-18) 0s passed
testMyData[17](17, 0.0199526231496888) 0s passed
testMyData[180](-76, 1.0E-18) 0.001s passed
testMyData[181](-75, 7.943282347242789E-19) 0s passed
testMyData[182](-74, 6.309573444801943E-19) 0s passed
testMyData[183](-73, 5.011872336272715E-19) 0s passed
testMyData[184](-72, 3.9810717055349853E-19) 0s passed
testMyData[185](-71, 3.162277660168379E-19) 0s passed
testMyData[186](-70, 2.5118864315095717E-19) 0s passed
testMyData[187](-69, 1.995262314968883E-19) 0.001s passed
testMyData[188](-68, 1.584893192461111E-19) 0s passed
testMyData[189](-67, 1.2589254117941713E-19) 0s passed
testMyData[18](18, 0.015848931924611134) 0s passed
testMyData[190](-66, 1.0E-19) 0.001s passed
testMyData[191](-65, 7.94328234724279E-20) 0s passed
testMyData[192](-64, 6.309573444801943E-20) 0s passed
testMyData[193](-63, 5.011872336272715E-20) 0.001s passed
testMyData[194](-62, 3.9810717055349855E-20) 0s passed
testMyData[195](-61, 3.162277660168379E-20) 0s passed
testMyData[196](-60, 2.511886431509572E-20) 0.001s passed
testMyData[197](-59, 1.9952623149688828E-20) 0s passed
testMyData[198](-58, 1.5848931924611108E-20) 0s passed
testMyData[199](-57, 1.2589254117941713E-20) 0s passed
testMyData[19](19, 0.012589254117941675) 0s passed
testMyData[1](1, 0.7943282347242815) 0.001s passed
testMyData[200](-56, 1.0E-20) 0.001s passed
testMyData[201](-55, 7.943282347242789E-21) 0s passed
testMyData[202](-54, 6.309573444801943E-21) 0s passed
testMyData[203](-53, 5.011872336272714E-21) 0.001s passed
testMyData[204](-52, 3.981071705534986E-21) 0s passed
testMyData[205](-51, 3.1622776601683792E-21) 0.001s passed
testMyData[206](-50, 2.511886431509572E-21) 0s passed
testMyData[207](-49, 1.9952623149688827E-21) 0s passed
testMyData[208](-48, 1.5848931924611108E-21) 0.001s passed
testMyData[209](-47, 1.2589254117941713E-21) 0s passed
testMyData[20](20, 0.01) 0s passed
testMyData[210](-46, 1.0E-21) 0s passed
testMyData[211](-45, 7.943282347242789E-22) 0s passed
testMyData[212](-44, 6.309573444801943E-22) 0s passed
testMyData[213](-43, 5.011872336272715E-22) 0s passed
testMyData[214](-42, 3.9810717055349856E-22) 0s passed
testMyData[215](-41, 3.1622776601683793E-22) 0.001s passed
testMyData[216](-40, 2.511886431509572E-22) 0s passed
testMyData[217](-39, 1.9952623149688828E-22) 0s passed
testMyData[218](-38, 1.584893192461111E-22) 0s passed
testMyData[219](-37, 1.2589254117941713E-22) 0s passed
testMyData[21](21, 0.007943282347242814) 0s passed
testMyData[220](-36, 1.0E-22) 0s passed
testMyData[221](-35, 7.943282347242789E-23) 0s passed
testMyData[222](-34, 6.309573444801943E-23) 0s passed
testMyData[223](-33, 5.011872336272715E-23) 0.001s passed
testMyData[224](-32, 3.9810717055349854E-23) 0s passed
testMyData[225](-31, 3.1622776601683793E-23) 0s passed
testMyData[226](-30, 2.511886431509572E-23) 0.001s passed
testMyData[227](-29, 1.995262314968883E-23) 0s passed
testMyData[228](-28, 1.584893192461111E-23) 0.001s passed
testMyData[229](-27, 1.2589254117941713E-23) 0s passed
testMyData[22](22, 0.00630957344480193) 0.001s passed
testMyData[230](-26, 1.0E-23) 0s passed
testMyData[231](-25, 7.943282347242789E-24) 0s passed
testMyData[232](-24, 6.309573444801943E-24) 0s passed
testMyData[233](-23, 5.011872336272715E-24) 0s passed
testMyData[234](-22, 3.9810717055349856E-24) 0s passed
testMyData[235](-21, 3.1622776601683795E-24) 0.001s passed
testMyData[236](-20, 2.5118864315095718E-24) 0s passed
testMyData[237](-19, 1.995262314968883E-24) 0s passed
testMyData[238](-18, 1.5848931924611108E-24) 0s passed
testMyData[239](-17, 1.2589254117941713E-24) 0s passed
testMyData[23](23, 0.005011872336272725) 0s passed
testMyData[240](-16, 1.0E-24) 0s passed
testMyData[241](-15, 7.943282347242789E-25) 0s passed
testMyData[242](-14, 6.309573444801943E-25) 0s passed
testMyData[243](-13, 5.011872336272715E-25) 0s passed
testMyData[244](-12, 3.9810717055349854E-25) 0.001s passed
testMyData[245](-11, 3.1622776601683796E-25) 0s passed
testMyData[246](-10, 2.511886431509572E-25) 0s passed
testMyData[247](-9, 1.995262314968883E-25) 0s passed
testMyData[248](-8, 1.584893192461111E-25) 0.001s passed
testMyData[249](-7, 1.2589254117941713E-25) 0s passed
testMyData[24](24, 0.003981071705534973) 0.001s passed
testMyData[250](-6, 1.0E-25) 0s passed
testMyData[251](-5, 7.943282347242789E-26) 0s passed
testMyData[252](-4, 6.309573444801943E-26) 0.001s passed
testMyData[253](-3, 5.0118723362727145E-26) 0s passed
testMyData[254](-2, 3.9810717055349856E-26) 0s passed
testMyData[25](25, 0.0031622776601683794) 0s passed
testMyData[26](26, 0.0025118864315095794) 0.001s passed
testMyData[27](27, 0.001995262314968879) 0s passed
testMyData[28](28, 0.001584893192461114) 0.001s passed
testMyData[29](29, 0.0012589254117941675) 0.001s passed
testMyData[2](2, 0.6309573444801932) 0s passed
testMyData[30](30, 0.001) 0s passed
testMyData[31](31, 7.943282347242813E-4) 0.001s passed
testMyData[32](32, 6.30957344480193E-4) 0s passed
testMyData[33](33, 5.011872336272725E-4) 0.001s passed
testMyData[34](34, 3.9810717055349735E-4) 0s passed
testMyData[35](35, 3.1622776601683794E-4) 0s passed
testMyData[36](36, 2.5118864315095795E-4) 0s passed
testMyData[37](37, 1.9952623149688788E-4) 0.001s passed
testMyData[38](38, 1.5848931924611142E-4) 0s passed
testMyData[39](39, 1.2589254117941674E-4) 0s passed
testMyData[3](3, 0.5011872336272722) 0.001s passed
testMyData[40](40, 1.0E-4) 0.001s passed
testMyData[41](41, 7.943282347242822E-5) 0s passed
testMyData[42](42, 6.309573444801929E-5) 0s passed
testMyData[43](43, 5.011872336272725E-5) 0.001s passed
testMyData[44](44, 3.9810717055349695E-5) 0s passed
testMyData[45](45, 3.1622776601683795E-5) 0.001s passed
testMyData[46](46, 2.5118864315095822E-5) 0.001s passed
testMyData[47](47, 1.9952623149688786E-5) 0s passed
testMyData[48](48, 1.584893192461114E-5) 0.001s passed
testMyData[49](49, 1.2589254117941661E-5) 0.001s passed
testMyData[4](4, 0.3981071705534972) 0s passed
testMyData[50](50, 1.0E-5) 0s passed
testMyData[51](51, 7.943282347242822E-6) 0s passed
testMyData[52](52, 6.30957344480193E-6) 0.001s passed
testMyData[53](53, 5.011872336272725E-6) 0.001s passed
testMyData[54](54, 3.981071705534969E-6) 0s passed
testMyData[55](55, 3.162277660168379E-6) 0.001s passed
testMyData[56](56, 2.5118864315095823E-6) 0s passed
testMyData[57](57, 1.9952623149688787E-6) 0s passed
testMyData[58](58, 1.584893192461114E-6) 0.001s passed
testMyData[59](59, 1.2589254117941661E-6) 0s passed
testMyData[5](5, 0.31622776601683794) 0s passed
testMyData[60](60, 1.0E-6) 0.001s passed
testMyData[61](61, 7.943282347242822E-7) 0s passed
testMyData[62](62, 6.30957344480193E-7) 0.001s passed
testMyData[63](63, 5.011872336272725E-7) 0s passed
testMyData[64](64, 3.981071705534969E-7) 0.001s passed
testMyData[65](65, 3.162277660168379E-7) 0s passed
testMyData[66](66, 2.5118864315095823E-7) 0.001s passed
testMyData[67](67, 1.9952623149688787E-7) 0s passed
testMyData[68](68, 1.584893192461114E-7) 0s passed
testMyData[69](69, 1.2589254117941662E-7) 0.001s passed
testMyData[6](6, 0.251188643150958) 0.001s passed
testMyData[70](70, 1.0E-7) 0s passed
testMyData[71](71, 7.943282347242822E-8) 0.001s passed
testMyData[72](72, 6.30957344480193E-8) 0s passed
testMyData[73](73, 5.011872336272725E-8) 0.001s passed
testMyData[74](74, 3.981071705534969E-8) 0s passed
testMyData[75](75, 3.162277660168379E-8) 0.001s passed
testMyData[76](76, 2.511886431509582E-8) 0s passed
testMyData[77](77, 1.9952623149688786E-8) 0.001s passed
testMyData[78](78, 1.5848931924611143E-8) 0s passed
testMyData[79](79, 1.2589254117941661E-8) 0.001s passed
testMyData[7](7, 0.19952623149688797) 0s passed
testMyData[80](80, 1.0E-8) 0s passed
testMyData[81](81, 7.943282347242822E-9) 0.001s passed
testMyData[82](82, 6.309573444801943E-9) 0s passed
testMyData[83](83, 5.011872336272715E-9) 0.001s passed
testMyData[84](84, 3.981071705534969E-9) 0s passed
testMyData[85](85, 3.1622776601683795E-9) 0.001s passed
testMyData[86](86, 2.511886431509582E-9) 0s passed
testMyData[87](87, 1.9952623149688828E-9) 0s passed
testMyData[88](88, 1.584893192461111E-9) 0s passed
testMyData[89](89, 1.2589254117941663E-9) 0s passed
testMyData[8](8, 0.15848931924611134) 0.001s passed
testMyData[90](90, 1.0E-9) 0s passed
testMyData[91](91, 7.943282347242822E-10) 0.001s passed
testMyData[92](92, 6.309573444801942E-10) 0s passed
testMyData[93](93, 5.011872336272714E-10) 0.001s passed
testMyData[94](94, 3.9810717055349694E-10) 0s passed
testMyData[95](95, 3.1622776601683795E-10) 0.001s passed
testMyData[96](96, 2.511886431509582E-10) 0s passed
testMyData[97](97, 1.9952623149688828E-10) 0.001s passed
testMyData[98](98, 1.584893192461111E-10) 0s passed
testMyData[99](99, 1.2589254117941662E-10) 0s passed
testMyData[9](9, 0.12589254117941673) 0s passed
testPhredScaleDoubleOps[0](0.0, 3233.062153431158) 0s passed
testPhredScaleDoubleOps[10](1.0E-5, 50) 0s passed
testPhredScaleDoubleOps[11](3.162277660168379E-8, 75) 0s passed
testPhredScaleDoubleOps[12](1.0E-6, 60) 0s passed
testPhredScaleDoubleOps[13](1.0E-9, 90) 0s passed
testPhredScaleDoubleOps[14](1.0E-7, 70) 0.001s passed
testPhredScaleDoubleOps[15](3.1622776601683794E-11, 105) 0s passed
testPhredScaleDoubleOps[16](1.0E-8, 80) 0.001s passed
testPhredScaleDoubleOps[17](1.0E-12, 120) 0s passed
testPhredScaleDoubleOps[18](1.0E-9, 90) 0s passed
testPhredScaleDoubleOps[19](3.1622776601683796E-14, 135) 0s passed
testPhredScaleDoubleOps[1](1.0, 0.0) 0s passed
testPhredScaleDoubleOps[20](1.0E-10, 100) 0s passed
testPhredScaleDoubleOps[21](1.0E-15, 150) 0s passed
testPhredScaleDoubleOps[22](1.0E-11, 110) 0s passed
testPhredScaleDoubleOps[23](3.1622776601683796E-17, 165) 0s passed
testPhredScaleDoubleOps[24](1.0E-12, 120) 0s passed
testPhredScaleDoubleOps[25](1.0E-18, 180) 0s passed
testPhredScaleDoubleOps[26](1.0E-13, 130) 0s passed
testPhredScaleDoubleOps[27](3.162277660168379E-20, 195) 0.001s passed
testPhredScaleDoubleOps[28](1.0E-14, 140) 0s passed
testPhredScaleDoubleOps[29](1.0E-21, 210) 0s passed
testPhredScaleDoubleOps[2](0.1, 10) 0s passed
testPhredScaleDoubleOps[30](1.0E-15, 150) 0s passed
testPhredScaleDoubleOps[31](3.1622776601683793E-23, 225) 0s passed
testPhredScaleDoubleOps[32](1.0E-16, 160) 0.001s passed
testPhredScaleDoubleOps[33](1.0E-24, 240) 0s passed
testPhredScaleDoubleOps[34](1.0E-17, 170) 0s passed
testPhredScaleDoubleOps[35](3.162277660168379E-26, 255) 0s passed
testPhredScaleDoubleOps[36](1.0E-18, 180) 0s passed
testPhredScaleDoubleOps[37](1.0E-27, 270) 0s passed
testPhredScaleDoubleOps[38](1.0E-19, 190) 0.001s passed
testPhredScaleDoubleOps[39](3.162277660168379E-29, 285) 0s passed
testPhredScaleDoubleOps[3](0.03162277660168379, 15) 0s passed
testPhredScaleDoubleOps[4](0.01, 20) 0s passed
testPhredScaleDoubleOps[5](0.001, 30) 0s passed
testPhredScaleDoubleOps[6](0.001, 30) 0s passed
testPhredScaleDoubleOps[7](3.1622776601683795E-5, 45) 0s passed
testPhredScaleDoubleOps[8](1.0E-4, 40) 0s passed
testPhredScaleDoubleOps[9](1.0E-6, 60) 0s passed
testPhredScaleLog10CorrectRate 0s passed
testQualCaches 0s passed
testQualToErrorProbDouble 0.010s passed
testTrueProbWithMinDouble 0s passed
testTrueProbWithVerySmallValue 0s passed