Class org.broadinstitute.hellbender.utils.downsampling.PositionalDownsamplerUnitTest

all > org.broadinstitute.hellbender.utils.downsampling > PositionalDownsamplerUnitTest
22

tests
0

failures
0

ignored
0.007s

duration
100%

successful

Tests

Test Duration Result
testPositionalDownsamplerInvalidheader 0s passed
testPositionalDownsamplerNegativeTargetCoverage 0s passed
testPositionalDownsamplerZeroTargetCoverage 0s passed
testPositionalDownsampler[0]([[foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1]], 1, [1], false) 0.001s passed
testPositionalDownsampler[10]([[foo 1:1-1, foo 1:1-1, foo 1:1-1], [foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1], [foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2]], 5, [3, 5, 4], false) 0s passed
testPositionalDownsampler[11]([[foo 1:1-1, foo 1:1-1, foo 1:1-1], [foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1], [foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2]], 1, [1, 1, 1], false) 0s passed
testPositionalDownsampler[12]([[foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1], [foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1], [foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2], [null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED]], 5, [5, 5, 5, 100], true) 0.001s passed
testPositionalDownsampler[13]([[foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1], [null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED]], 5, [5], false) 0s passed
testPositionalDownsampler[14]([[foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1], [null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED], [foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1], [null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED]], 5, [5, 5], false) 0s passed
testPositionalDownsampler[15]([[foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1], [null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED], [foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1], [null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED], [null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED]], 5, [5, 5, 100], true) 0.002s passed
testPositionalDownsampler[16]([[null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED, null UNMAPPED]], 1, [10], true) 0s passed
testPositionalDownsampler[17]([], 1, [], false) 0s passed
testPositionalDownsampler[1]([[foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1]], 5, [5], false) 0s passed
testPositionalDownsampler[2]([[foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1]], 10, [10], false) 0s passed
testPositionalDownsampler[3]([[foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1]], 15, [10], false) 0s passed
testPositionalDownsampler[4]([[foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1], [foo 1:2-2, foo 1:2-2, foo 1:2-2, foo 1:2-2, foo 1:2-2, foo 1:2-2, foo 1:2-2, foo 1:2-2]], 5, [5, 5], false) 0s passed
testPositionalDownsampler[5]([[foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1], [foo 1:2-2, foo 1:2-2, foo 1:2-2, foo 1:2-2, foo 1:2-2]], 5, [5, 5], false) 0.001s passed
testPositionalDownsampler[6]([[foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1], [foo 1:2-2, foo 1:2-2, foo 1:2-2]], 5, [5, 3], false) 0s passed
testPositionalDownsampler[7]([[foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1], [foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1]], 5, [5, 5], false) 0s passed
testPositionalDownsampler[8]([[foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1], [foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1], [foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2]], 5, [5, 5, 5], false) 0.001s passed
testPositionalDownsampler[9]([[foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1, foo 1:1-1], [foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1, foo 2:1-1], [foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2, foo 2:2-2]], 10, [10, 10, 10], false) 0s passed
testSignalNoMoreReadsBefore 0.001s passed