Class org.broadinstitute.hellbender.utils.recalibration.QualQuantizerUnitTest
|
100%
successful |
Tests
| Test | Duration | Result |
|---|---|---|
| testMinInterestingQual | 0.002s | passed |
| testQualInterval[0](TestDataProvider()) | 0s | passed |
| testQualInterval[1](TestDataProvider()) | 0s | passed |
| testQualInterval[2](TestDataProvider()) | 0.001s | passed |
| testQualInterval[3](TestDataProvider()) | 0s | passed |
| testQualInterval[4](TestDataProvider()) | 0s | passed |
| testQualInterval[5](TestDataProvider()) | 0s | passed |
| testQualInterval[6](TestDataProvider()) | 0s | passed |
| testQuantizer[0](QQTest nLevels=5 nObs=[0,0,1000,0,0] map=[0,1,2,3,4]) | 0s | passed |
| testQuantizer[1](QQTest nLevels=1 nObs=[0,0,1000,0,0] map=[2,2,2,2,2]) | 0.001s | passed |
| testQuantizer[2](QQTest nLevels=2 nObs=[0,0,1000,0,1000] map=[2,2,2,2,4]) | 0s | passed |
| testQuantizer[3](QQTest nLevels=2 nObs=[0,0,1000,1,1000] map=[2,2,2,4,4]) | 0s | passed |
| testQuantizer[4](QQTest nLevels=2 nObs=[0,0,1000,10,1000] map=[2,2,2,2,4]) | 0s | passed |
Standard error
20:36:51.817 WARN gatk - cfg: QQTest nLevels=5 nObs=[0,0,1000,0,0] map=[0,1,2,3,4] 20:36:51.818 WARN gatk - cfg: QQTest nLevels=1 nObs=[0,0,1000,0,0] map=[2,2,2,2,2] 20:36:51.818 WARN gatk - cfg: QQTest nLevels=2 nObs=[0,0,1000,0,1000] map=[2,2,2,2,4] 20:36:51.818 WARN gatk - cfg: QQTest nLevels=2 nObs=[0,0,1000,1,1000] map=[2,2,2,4,4] 20:36:51.818 WARN gatk - cfg: QQTest nLevels=2 nObs=[0,0,1000,10,1000] map=[2,2,2,2,4]