Class org.broadinstitute.hellbender.engine.VariantWalkerGCSSupportIntegrationTest

all > org.broadinstitute.hellbender.engine > VariantWalkerGCSSupportIntegrationTest
6

tests
0

failures
0

ignored
46.847s

duration
100%

successful

Tests

Test Duration Result
testReadVCFOnGCS[0](org/broadinstitute/hellbender/engine/dbsnp_138.b37.20.10000000-10010000.vcf, null, /home/runner/work/gatk/gatk/src/test/resources/org/broadinstitute/hellbender/engine/GCSTests/expected_VariantWalkerGCSSupportIntegrationTest_vcf_wholefile.vcf) 6.034s passed
testReadVCFOnGCS[1](org/broadinstitute/hellbender/engine/dbsnp_138.b37.20.10000000-10010000.vcf.block.gz, null, /home/runner/work/gatk/gatk/src/test/resources/org/broadinstitute/hellbender/engine/GCSTests/expected_VariantWalkerGCSSupportIntegrationTest_vcf_wholefile.vcf) 6.250s passed
testReadVCFOnGCS[2](org/broadinstitute/hellbender/engine/dbsnp_138.b37.20.10000000-10010000.vcf, [20:10004000-10006000], /home/runner/work/gatk/gatk/src/test/resources/org/broadinstitute/hellbender/engine/GCSTests/expected_VariantWalkerGCSSupportIntegrationTest_vcf_single_interval.vcf) 11.615s passed
testReadVCFOnGCS[3](org/broadinstitute/hellbender/engine/dbsnp_138.b37.20.10000000-10010000.vcf.block.gz, [20:10004000-10006000], /home/runner/work/gatk/gatk/src/test/resources/org/broadinstitute/hellbender/engine/GCSTests/expected_VariantWalkerGCSSupportIntegrationTest_vcf_single_interval.vcf) 5.617s passed
testReadVCFOnGCS[4](org/broadinstitute/hellbender/engine/dbsnp_138.b37.20.10000000-10010000.vcf, [20:10004000-10006000, 20:10008000-10009000], /home/runner/work/gatk/gatk/src/test/resources/org/broadinstitute/hellbender/engine/GCSTests/expected_VariantWalkerGCSSupportIntegrationTest_vcf_multiple_intervals.vcf) 4.685s passed
testReadVCFOnGCS[5](org/broadinstitute/hellbender/engine/dbsnp_138.b37.20.10000000-10010000.vcf.block.gz, [20:10004000-10006000, 20:10008000-10009000], /home/runner/work/gatk/gatk/src/test/resources/org/broadinstitute/hellbender/engine/GCSTests/expected_VariantWalkerGCSSupportIntegrationTest_vcf_multiple_intervals.vcf) 12.646s passed

Standard output

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[20:33:31] Executing test VariantWalkerGCSSupportIntegrationTest:testReadVCFOnGCS
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[20:33:37] Executing test VariantWalkerGCSSupportIntegrationTest:testReadVCFOnGCS
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[20:33:43] Executing test VariantWalkerGCSSupportIntegrationTest:testReadVCFOnGCS
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[20:33:55] Executing test VariantWalkerGCSSupportIntegrationTest:testReadVCFOnGCS
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[20:34:00] Executing test VariantWalkerGCSSupportIntegrationTest:testReadVCFOnGCS
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[20:34:05] Executing test VariantWalkerGCSSupportIntegrationTest:testReadVCFOnGCS

Standard error

[June 12, 2025 at 8:33:37 PM UTC] org.broadinstitute.hellbender.tools.walkers.variantutils.SelectVariants done. Elapsed time: 0.10 minutes.
Runtime.totalMemory()=524288000
[June 12, 2025 at 8:33:43 PM UTC] org.broadinstitute.hellbender.tools.walkers.variantutils.SelectVariants done. Elapsed time: 0.10 minutes.
Runtime.totalMemory()=524288000
[June 12, 2025 at 8:33:55 PM UTC] org.broadinstitute.hellbender.tools.walkers.variantutils.SelectVariants done. Elapsed time: 0.19 minutes.
Runtime.totalMemory()=524288000
[June 12, 2025 at 8:34:00 PM UTC] org.broadinstitute.hellbender.tools.walkers.variantutils.SelectVariants done. Elapsed time: 0.09 minutes.
Runtime.totalMemory()=524288000
[June 12, 2025 at 8:34:05 PM UTC] org.broadinstitute.hellbender.tools.walkers.variantutils.SelectVariants done. Elapsed time: 0.08 minutes.
Runtime.totalMemory()=524288000
[June 12, 2025 at 8:34:18 PM UTC] org.broadinstitute.hellbender.tools.walkers.variantutils.SelectVariants done. Elapsed time: 0.21 minutes.
Runtime.totalMemory()=524288000