Class org.broadinstitute.hellbender.tools.copynumber.formats.collections.SimpleCountCollectionUnitTest
Tests
| Test |
Duration |
Result |
| testReadFromGCS[0](org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv) |
5.977s |
passed |
| testReadFromGCS[1](org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv.gz) |
5.962s |
passed |
| testReadOverlappingSubsetFromGCSNonOverlappingIntervals[0](org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv) |
1.467s |
passed |
| testReadOverlappingSubsetFromGCSNonOverlappingIntervals[1](org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv.gz) |
0.778s |
passed |
| testReadOverlappingSubsetFromGCSSortedIntervals[0](org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv) |
0.656s |
passed |
| testReadOverlappingSubsetFromGCSSortedIntervals[1](org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv.gz) |
2.522s |
passed |
| testReadOverlappingSubsetFromGCS[0](org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv) |
18.219s |
passed |
| testReadOverlappingSubsetFromGCS[1](org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv.gz) |
15.411s |
passed |
Standard error
20:42:59.557 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv
20:43:09.179 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv.gz
20:43:11.290 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv
20:43:12.401 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv
20:43:13.162 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv
20:43:15.242 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv
20:43:23.685 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv
20:43:24.556 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv
20:43:25.523 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv
20:43:28.753 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv
20:43:33.141 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv.gz
20:43:35.581 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv.gz
20:43:36.460 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv.gz
20:43:38.224 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv.gz
20:43:39.119 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv.gz
20:43:39.979 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv.gz
20:43:43.270 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv.gz
20:43:44.165 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv.gz
20:43:45.680 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv
20:43:46.413 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv.gz
20:43:47.129 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv
20:43:49.611 INFO FeatureManager - Using codec SimpleCountCodec to read file gs://hellbender/test/resources/org/broadinstitute/hellbender/tools/copynumber/formats/collections/simple-count-collection-integer-counts.counts.tsv.gz