Class org.broadinstitute.hellbender.utils.gvs.bigquery.BigQueryUtilsUnitTest

8

tests

0

failures

0

ignored

16.091s

duration

100%

successful

Tests

Test Duration Result
testExecuteQueryAllRecords 1.391s passed
testExecuteQueryInBatchMode 1.105s passed
testExecuteQueryInBatchModeWithProject 1.169s passed
testExecuteQueryWithWhereClause 1.143s passed
testQueryWithEmptyDatasetStorageAPI 4.561s passed
testQueryWithNullLabel 1.111s passed
testQueryWithStorageAPI 4.496s passed
testSpecifiedExecuteQuery 1.115s passed

Standard error

20:51:42.853 INFO  BigQueryUtils - Executing Query: 

SELECT * FROM `broad-dsde-dev.gatk_bigquery_test_dataset.gatk_bigquery_test_table1`
20:51:42.858 INFO  BigQueryUtils - Sending query to server...
20:51:43.413 INFO  BigQueryUtils - Waiting for query JobId{project=broad-dsde-dev, job=8704bc79-07b9-454e-beb8-90d121e442bc, location=US} to complete...
20:51:43.674 INFO  BigQueryUtils - Retrieving query results...
20:51:44.219 INFO  BigQueryUtils - 0.00 MB actually scanned for job: JobId{project=broad-dsde-dev, job=8704bc79-07b9-454e-beb8-90d121e442bc, location=US}
20:51:44.220 INFO  BigQueryUtils - Query returned 3 results.
20:51:44.223 INFO  BigQueryUtils - Executing Query: 

SELECT * FROM `broad-dsde-dev.gatk_bigquery_test_dataset.gatk_bigquery_test_table1`
20:51:44.223 INFO  BigQueryUtils - Sending query to server...
20:51:44.617 INFO  BigQueryUtils - Waiting for query JobId{project=broad-dsde-dev, job=b7defe4a-ba08-4349-9b5b-32abc0c08ec5, location=US} to complete...
20:51:44.881 INFO  BigQueryUtils - Retrieving query results...
20:51:45.325 INFO  BigQueryUtils - 0.00 MB actually scanned for job: JobId{project=broad-dsde-dev, job=b7defe4a-ba08-4349-9b5b-32abc0c08ec5, location=US}
20:51:45.326 INFO  BigQueryUtils - Query returned 3 results.
20:51:45.328 INFO  BigQueryUtils - Executing Query: 

SELECT * FROM `broad-dsde-dev.gatk_bigquery_test_dataset.gatk_bigquery_test_table1`
20:51:45.328 INFO  BigQueryUtils - Sending query to server...
20:51:45.727 INFO  BigQueryUtils - Waiting for query JobId{project=broad-dsde-dev, job=a951a327-b2ae-41f1-9358-90776b8cab2b, location=US} to complete...
20:51:45.967 INFO  BigQueryUtils - Retrieving query results...
20:51:46.495 INFO  BigQueryUtils - 0.00 MB actually scanned for job: JobId{project=broad-dsde-dev, job=a951a327-b2ae-41f1-9358-90776b8cab2b, location=US}
20:51:46.495 INFO  BigQueryUtils - Query returned 3 results.
20:51:46.496 INFO  gatk - testwhereclauseb98fa4f9-008b-469c-8597-1bbbae5ce500
20:51:46.498 INFO  BigQueryUtils - Executing Query: 

SELECT * FROM `broad-dsde-dev.gatk_bigquery_test_dataset.gatk_bigquery_test_table1` WHERE name = 'Fred'
20:51:46.498 INFO  BigQueryUtils - Sending query to server...
20:51:46.911 INFO  BigQueryUtils - Waiting for query JobId{project=broad-dsde-dev, job=ba8a1b5c-6d67-489c-a23f-4e03117efb38, location=US} to complete...
20:51:47.159 INFO  BigQueryUtils - Retrieving query results...
20:51:47.639 INFO  BigQueryUtils - 0.00 MB actually scanned for job: JobId{project=broad-dsde-dev, job=ba8a1b5c-6d67-489c-a23f-4e03117efb38, location=US}
20:51:47.639 INFO  BigQueryUtils - Query returned 1 results.
20:51:47.640 INFO  BigQueryUtils - SELECT * FROM `broad-dsde-dev.gatk_bigquery_test_dataset.gatk_bigquery_test_table1` WHERE false
20:51:48.279 INFO  BigQueryUtils - Estimated 0 MB scanned
20:51:48.281 INFO  BigQueryUtils - Executing Query: 

 CREATE TABLE `broad-dsde-dev.gatk_bigquery_test_dataset.temp_table_87049362_5307_4c5d_89f0_d0f46db6e2ae`
OPTIONS(
  expiration_timestamp=TIMESTAMP_ADD(CURRENT_TIMESTAMP(), INTERVAL 1 DAY)
) AS
SELECT * FROM `broad-dsde-dev.gatk_bigquery_test_dataset.gatk_bigquery_test_table1` WHERE false
20:51:48.281 INFO  BigQueryUtils - Sending query to server...
20:51:48.703 INFO  BigQueryUtils - Waiting for query JobId{project=broad-dsde-dev, job=26d7aa99-0155-411d-9f70-14c27aa90f86, location=US} to complete...
20:51:50.387 INFO  BigQueryUtils - Retrieving query results...
20:51:50.653 INFO  BigQueryUtils - 0.00 MB actually scanned for job: JobId{project=broad-dsde-dev, job=26d7aa99-0155-411d-9f70-14c27aa90f86, location=US}
20:51:50.654 INFO  BigQueryUtils - Query returned 0 results.
20:51:50.833 INFO  BigQueryUtils - Query temp table created with 0 rows and 0 bytes in size
20:51:50.835 INFO  StorageAPIAvroReader - Using Storage API from broad-dsde-dev.gatk_bigquery_test_dataset.temp_table_87049362_5307_4c5d_89f0_d0f46db6e2ae with 'null'
20:51:51.145 INFO  log - Logging initialized @15174ms to org.eclipse.jetty.util.log.Slf4jLog
20:51:51.912 INFO  StorageAPIAvroReader - Storage API Session ID: projects/broad-dsde-dev/locations/us/sessions/CAISDE9tMW1mOGtqaC02bBoCanIaAmpk
20:51:51.913 INFO  StorageAPIAvroReader - Storage API Estimated Bytes Scanned for broad-dsde-dev.gatk_bigquery_test_dataset.temp_table_87049362_5307_4c5d_89f0_d0f46db6e2ae:0
20:51:52.203 INFO  BigQueryUtils - Executing Query: 

SELECT * FROM `broad-dsde-dev.gatk_bigquery_test_dataset.gatk_bigquery_test_table1`
20:51:52.203 INFO  BigQueryUtils - Sending query to server...
20:51:52.591 INFO  BigQueryUtils - Waiting for query JobId{project=broad-dsde-dev, job=3fd659de-b6b5-4fce-854c-3b2e30054872, location=US} to complete...
20:51:52.873 INFO  BigQueryUtils - Retrieving query results...
20:51:53.311 INFO  BigQueryUtils - 0.00 MB actually scanned for job: JobId{project=broad-dsde-dev, job=3fd659de-b6b5-4fce-854c-3b2e30054872, location=US}
20:51:53.312 INFO  BigQueryUtils - Query returned 3 results.
20:51:53.312 INFO  BigQueryUtils - SELECT * FROM `broad-dsde-dev.gatk_bigquery_test_dataset.gatk_bigquery_test_table1`
20:51:53.949 INFO  BigQueryUtils - Estimated 0 MB scanned
20:51:53.951 INFO  BigQueryUtils - Executing Query: 

 CREATE TABLE `broad-dsde-dev.gatk_bigquery_test_dataset.temp_table_36694cd9_58b9_4617_8363_f9050e9232bf`
OPTIONS(
  expiration_timestamp=TIMESTAMP_ADD(CURRENT_TIMESTAMP(), INTERVAL 1 DAY)
) AS
SELECT * FROM `broad-dsde-dev.gatk_bigquery_test_dataset.gatk_bigquery_test_table1`
20:51:53.951 INFO  BigQueryUtils - Sending query to server...
20:51:54.417 INFO  BigQueryUtils - Waiting for query JobId{project=broad-dsde-dev, job=83a53a47-2101-4bf2-a1d6-f7cbf29f9559, location=US} to complete...
20:51:55.992 INFO  BigQueryUtils - Retrieving query results...
20:51:56.254 INFO  BigQueryUtils - 0.00 MB actually scanned for job: JobId{project=broad-dsde-dev, job=83a53a47-2101-4bf2-a1d6-f7cbf29f9559, location=US}
20:51:56.254 INFO  BigQueryUtils - Query returned 0 results.
20:51:56.472 INFO  BigQueryUtils - Query temp table created with 3 rows and 38 bytes in size
20:51:56.473 INFO  StorageAPIAvroReader - Using Storage API from broad-dsde-dev.gatk_bigquery_test_dataset.temp_table_36694cd9_58b9_4617_8363_f9050e9232bf with 'null'
20:51:57.490 INFO  StorageAPIAvroReader - Storage API Session ID: projects/broad-dsde-dev/locations/us/sessions/CAISDElCa3lHS1NZVTJLbBoCanIaAmpk
20:51:57.491 INFO  StorageAPIAvroReader - Storage API Estimated Bytes Scanned for broad-dsde-dev.gatk_bigquery_test_dataset.temp_table_36694cd9_58b9_4617_8363_f9050e9232bf:22
20:51:57.810 INFO  BigQueryUtils - Sending query to server...
20:51:58.239 INFO  BigQueryUtils - Waiting for query JobId{project=broad-dsde-dev, job=0259d26b-f958-474a-b524-25847f6f6e86, location=US} to complete...
20:51:58.477 INFO  BigQueryUtils - Retrieving query results...
20:51:58.923 INFO  BigQueryUtils - 0.00 MB actually scanned for job: JobId{project=broad-dsde-dev, job=0259d26b-f958-474a-b524-25847f6f6e86, location=US}