Package org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode
|
99%
successful |
Failed tests
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[24](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@5dbd7f00, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@20ac198e, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@f7ad1733, -1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[25](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@6212dc7d, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@20ac198e, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@f7ad1733, -1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[28](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@661ec798, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@20ac198e, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@63022169, -1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[29](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@316a682b, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@7cd22b23, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@6dc0fd4, 1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[30](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@134ccb03, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@f7e4f99f, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@c0790f82, -1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[31](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@7072606, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@da49193c, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@de14efe5, 1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[32](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@2d170dac, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@20ac198e, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@160b0875, -1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[33](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@2d58136, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@2fdb122f, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@6dc0fd4, 1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[34](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@760dc63, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@20ac198e, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@f7ad1733, -1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[35](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@6b8de9dc, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@117d20ed, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@6dc0fd4, 1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[36](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@4e44b713, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@f7e4f99f, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@6b14170d, -1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[37](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@453ff774, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@84e420c7, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@de14efe5, 1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[38](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@3a516e4d, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@f7e4f99f, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@edb2856d, -8)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[39](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@40cb19d5, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@7828f27, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@de14efe5, 8)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[40](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@1acf7db2, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@f7e4f99f, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@c1757a6d, -1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[41](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@6225c800, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@db458427, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@de14efe5, 1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[42](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@1c0455c4, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@f7e4f99f, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@5debd2f9, -1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[43](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@29db9746, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@77bbdcb3, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@de14efe5, 1)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[46](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@17cea679, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@f7e4f99f, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@de14efe5, -8)
- GencodeFuncotationFactoryUnitTest. testGencodeFuncotationComparatorUnitTest[47](org.broadinstitute.hellbender.tools.funcotator.TranscriptSelectionMode$BestEffectGencodeFuncotationComparator@3e8cf854, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@de14efe5, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@f7e4f99f, 8)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[0]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@b8547a75, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@596cc614, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@280f4148], [ENST0000002.3], ENST0000002.3)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[10]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@2135f8e7, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@7c43506f], [ENST0000003.8], ENST0000002.3)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[1]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@b8547a75, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@596cc614, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@280f4148], [ENST0000001.4], ENST0000001.4)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[2]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@cbfc0c2f, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@596cc614, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@280f4148], [ENST0000002.3, ENST0000001.4], ENST0000001.4)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[3]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@cbfc0c2f, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@596cc614, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@280f4148], [ENST0000002.3, ENST0000001.4], ENST0000001.4)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[4]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@cbfc0c2f, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@596cc614], [ENST0000002.3, ENST0000001.4], ENST0000001.4)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[5]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@cbfc0c2f, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@6d1457ce], [ENST0000002.3, ENST0000001.4], ENST0000001.4)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[6]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@bccd138e, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@7c43506f], [ENST0000002.3, ENST0000001.4], ENST0000002.3)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[7]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@cb58356e, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@7c43506f], [ENST0000002.3, ENST0000001.4], ENST0000002.3)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[8]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@db99a1b7, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@7c43506f], [ENST0000002.3, ENST0000001.4], ENST0000002.3)
- GencodeFuncotationFactoryUnitTest. testSortingOfUserRequestedTranscripts[9]([org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@2135f8e7, org.broadinstitute.hellbender.tools.funcotator.dataSources.gencode.GencodeFuncotation@7c43506f], [ENST0000002.3, ENST0000001.4], ENST0000002.3)
Classes
| Class | Tests | Failures | Ignored | Duration | Success rate |
|---|---|---|---|---|---|
| GencodeFuncotationFactoryUnitTest | 5143 | 31 | 1 | 5m58.06s | 99% |
| GencodeFuncotationUnitTest | 50 | 0 | 0 | 0.004s | 100% |
| SegmentExonUtilsUnitTest | 50 | 0 | 0 | 0.008s | 100% |