Test Summary

223

tests
0

failures
0

ignored
17m48.54s

duration
100%

successful

Classes

Class Tests Failures Ignored Duration Success rate
org.broadinstitute.hellbender.tools.copynumber.DetermineGermlineContigPloidyIntegrationTest 6 0 0 4m32.56s 100%
org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCallerIntegrationTest 8 0 0 6m8.69s 100%
org.broadinstitute.hellbender.tools.copynumber.PostprocessGermlineCNVCallsIntegrationTest 23 0 0 2m42.82s 100%
org.broadinstitute.hellbender.tools.copynumber.PostprocessGermlineCNVCallsUnitTest 2 0 0 55.881s 100%
org.broadinstitute.hellbender.tools.copynumber.plotting.PlotDenoisedCopyRatiosIntegrationTest 2 0 0 1.458s 100%
org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegmentsIntegrationTest 4 0 0 2.346s 100%
org.broadinstitute.hellbender.tools.examples.ExampleStreamingPythonExecutorIntegrationTest 6 0 0 2.411s 100%
org.broadinstitute.hellbender.tools.spark.pipelines.metrics.CollectBaseDistributionByCycleSparkIntegrationTest 9 0 0 5.516s 100%
org.broadinstitute.hellbender.tools.spark.pipelines.metrics.CollectInsertSizeMetricsSparkIntegrationTest 6 0 0 3.100s 100%
org.broadinstitute.hellbender.tools.spark.pipelines.metrics.InsertSizeMetricsCollectorSparkUnitTest 6 0 0 2.185s 100%
org.broadinstitute.hellbender.tools.spark.pipelines.metrics.MeanQualityByCycleSparkIntegrationTest 2 0 0 2.637s 100%
org.broadinstitute.hellbender.tools.spark.pipelines.metrics.QualityScoreDistributionSparkIntegrationTest 8 0 0 3.367s 100%
org.broadinstitute.hellbender.tools.walkers.bqsr.AnalyzeCovariatesIntegrationTest 6 0 0 11.798s 100%
org.broadinstitute.hellbender.tools.walkers.varianteval.AlleleFrequencyQCIntegrationTest 1 0 0 3.139s 100%
org.broadinstitute.hellbender.tools.walkers.vqsr.NVScoreVariantsIntegrationTest 2 0 0 50.163s 100%
org.broadinstitute.hellbender.tools.walkers.vqsr.scalable.ExtractVariantAnnotationsIntegrationTest 12 0 0 4.774s 100%
org.broadinstitute.hellbender.tools.walkers.vqsr.scalable.ScoreVariantAnnotationsIntegrationTest 12 0 0 23.143s 100%
org.broadinstitute.hellbender.tools.walkers.vqsr.scalable.SystemCommandUtilsTest 2 0 0 0.021s 100%
org.broadinstitute.hellbender.tools.walkers.vqsr.scalable.TrainVariantAnnotationsModelIntegrationTest 15 0 0 1m8.23s 100%
org.broadinstitute.hellbender.utils.R.RScriptExecutorUnitTest 7 0 0 1.577s 100%
org.broadinstitute.hellbender.utils.R.RScriptLibraryUnitTest 3 0 0 0.004s 100%
org.broadinstitute.hellbender.utils.python.PythonEnvironmentIntegrationTest 14 0 0 10.180s 100%
org.broadinstitute.hellbender.utils.python.PythonScriptExecutorUnitTest 14 0 0 0.262s 100%
org.broadinstitute.hellbender.utils.python.StreamingPythonScriptExecutorUnitTest 42 0 0 11.769s 100%
org.broadinstitute.hellbender.utils.runtime.StreamingProcessControllerUnitTest 11 0 0 0.515s 100%