Test Summary

223

tests
0

failures
0

ignored
17m49.95s

duration
100%

successful

Classes

Class Tests Failures Ignored Duration Success rate
org.broadinstitute.hellbender.tools.copynumber.DetermineGermlineContigPloidyIntegrationTest 6 0 0 4m22.83s 100%
org.broadinstitute.hellbender.tools.copynumber.GermlineCNVCallerIntegrationTest 8 0 0 6m2.96s 100%
org.broadinstitute.hellbender.tools.copynumber.PostprocessGermlineCNVCallsIntegrationTest 23 0 0 2m53.52s 100%
org.broadinstitute.hellbender.tools.copynumber.PostprocessGermlineCNVCallsUnitTest 2 0 0 56.549s 100%
org.broadinstitute.hellbender.tools.copynumber.plotting.PlotDenoisedCopyRatiosIntegrationTest 2 0 0 1.378s 100%
org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegmentsIntegrationTest 4 0 0 2.382s 100%
org.broadinstitute.hellbender.tools.examples.ExampleStreamingPythonExecutorIntegrationTest 6 0 0 2.625s 100%
org.broadinstitute.hellbender.tools.spark.pipelines.metrics.CollectBaseDistributionByCycleSparkIntegrationTest 9 0 0 5.283s 100%
org.broadinstitute.hellbender.tools.spark.pipelines.metrics.CollectInsertSizeMetricsSparkIntegrationTest 6 0 0 5.449s 100%
org.broadinstitute.hellbender.tools.spark.pipelines.metrics.InsertSizeMetricsCollectorSparkUnitTest 6 0 0 1.357s 100%
org.broadinstitute.hellbender.tools.spark.pipelines.metrics.MeanQualityByCycleSparkIntegrationTest 2 0 0 1.206s 100%
org.broadinstitute.hellbender.tools.spark.pipelines.metrics.QualityScoreDistributionSparkIntegrationTest 8 0 0 3.614s 100%
org.broadinstitute.hellbender.tools.walkers.bqsr.AnalyzeCovariatesIntegrationTest 6 0 0 11.465s 100%
org.broadinstitute.hellbender.tools.walkers.varianteval.AlleleFrequencyQCIntegrationTest 1 0 0 3.278s 100%
org.broadinstitute.hellbender.tools.walkers.vqsr.NVScoreVariantsIntegrationTest 2 0 0 53.359s 100%
org.broadinstitute.hellbender.tools.walkers.vqsr.scalable.ExtractVariantAnnotationsIntegrationTest 12 0 0 4.635s 100%
org.broadinstitute.hellbender.tools.walkers.vqsr.scalable.ScoreVariantAnnotationsIntegrationTest 12 0 0 23.832s 100%
org.broadinstitute.hellbender.tools.walkers.vqsr.scalable.SystemCommandUtilsTest 2 0 0 0.020s 100%
org.broadinstitute.hellbender.tools.walkers.vqsr.scalable.TrainVariantAnnotationsModelIntegrationTest 15 0 0 1m10.86s 100%
org.broadinstitute.hellbender.utils.R.RScriptExecutorUnitTest 7 0 0 1.577s 100%
org.broadinstitute.hellbender.utils.R.RScriptLibraryUnitTest 3 0 0 0.004s 100%
org.broadinstitute.hellbender.utils.python.PythonEnvironmentIntegrationTest 14 0 0 10.086s 100%
org.broadinstitute.hellbender.utils.python.PythonScriptExecutorUnitTest 14 0 0 0.263s 100%
org.broadinstitute.hellbender.utils.python.StreamingPythonScriptExecutorUnitTest 42 0 0 10.889s 100%
org.broadinstitute.hellbender.utils.runtime.StreamingProcessControllerUnitTest 11 0 0 0.536s 100%