Fuzz introspector: hts_open_fuzzer
For issues and ideas: https://github.com/ossf/fuzz-introspector/issues

Fuzz blockers

The followings are the branches where fuzzer fails to bypass.

Unique non-covered Complexity Unique Reachable Complexities Unique Reachable Functions All non-covered Complexity All Reachable Complexity Function Name Function Callsite Blocked Branch
6470 6470 1 :

['cram_write_eof_block']

6496 7375 cram_close call site /src/htslib/cram/cram_io.c:5504
6365 6365 2 :

['cram_update_curr_slice', 'cram_flush_container_mt']

17031 18109 cram_close call site /src/htslib/cram/cram_io.c:5475
4170 4170 4 :

['cram_flush_result', 'hts_tpool_process_destroy', 'pthread_mutex_destroy', 'hts_tpool_process_flush']

10666 11545 cram_close call site /src/htslib/cram/cram_io.c:5486
2787 2787 1 :

['hts_process_opts']

2795 2795 hts_hopen call site /src/htslib/hts.c:1503
2701 2719 5 :

['strerror', '__errno_location', 'hts_opt_apply', 'hts_log', 'hclose_abruptly']

2701 2719 hts_open_format call site /src/htslib/hts.c:900
1023 1079 10 :

['hts_idx_push', 'bcf_seqname_safe', 'float_to_le.1852', 'u32_to_le.1813', 'i32_to_le.1812', 'hts_log', 'u16_to_le.1814', 'bcf1_sync', 'bgzf_write', 'bcf_strerror']

1023 1079 bcf_write call site /src/htslib/vcf.c:1970
734 734 1 :

['bcf_hdr_append']

734 734 bcf_hdr_init call site /src/htslib/vcf.c:1209
630 640 10 :

['sam_hdr_tid2name', 'sam_hdr_find_tag_id', 'cram_get_block_by_id', 'ks_free.2171', 'hts_md5_update', 'hts_md5_destroy', 'md5_print', 'memcmp', 'hts_md5_init', 'hts_md5_final']

3627 3917 cram_decode_slice call site /src/htslib/cram/cram_decode.c:2395
410 7682 19 :

['free', 'cram_read_container', 'hts_tpool_process_len', 'cram_seek', 'cram_free_slice', 'pthread_mutex_unlock', 'hts_log', 'cram_free_container', 'sam_hrecs_sort_order', 'hts_tpool_result_data', 'cram_decode_compression_header', 'cram_read_block', 'hts_tpool_next_result_wait', 'pthread_mutex_lock', 'hts_tpool_delete_result', 'cram_decode_slice_mt', 'cram_read_slice', 'hts_tpool_process_qsize', 'hts_tpool_process_empty']

410 7682 cram_next_slice call site /src/htslib/cram/cram_decode.c:3228
394 394 2 :

['bgzf_flush_try', 'bgzf_write']

717 767 sam_write1 call site /src/htslib/sam.c:4462
394 394 2 :

['bgzf_flush_try', 'bgzf_write']

535 545 vcf_write call site /src/htslib/vcf.c:3444
387 387 2 :

['bgzf_flush', 'bgzf_write']

387 387 vcf_hdr_write call site /src/htslib/vcf.c:2267

Fuzzer calltree

0 LLVMFuzzerTestOneInput [function] [call site] 00000
1 abort [call site] 00001
1 hopen [function] [call site] 00002
2 find_scheme_handler [function] [call site] 00003
3 isalnum_c [function] [call site] 00004
4 __ctype_b_loc [call site] 00005
3 tolower_c [function] [call site] 00006
4 tolower [call site] 00007
3 pthread_mutex_lock [call site] 00008
3 load_hfile_plugins [function] [call site] 00009
4 kh_init_scheme_string [function] [call site] 00010
5 calloc [call site] 00011
4 hfile_add_scheme_handler [function] [call site] 00012
5 try_exe_add_scheme_handler [function] [call site] 00013
5 hts_log [function] [call site] 00014
6 __errno_location [call site] 00015
6 get_severity_tag [function] [call site] 00016
6 fprintf [call site] 00017
6 vfprintf [call site] 00018
6 fprintf [call site] 00019
6 __errno_location [call site] 00020
5 kh_put_scheme_string [function] [call site] 00021
6 kh_resize_scheme_string [function] [call site] 00022
7 __ac_X31_hash_string [function] [call site] 00023
5 __errno_location [call site] 00024
4 hfile_add_scheme_handler [function] [call site] 00027
4 hfile_add_scheme_handler [function] [call site] 00028
4 init_add_plugin [function] [call site] 00033
4 init_add_plugin [function] [call site] 00034
4 hfile_plugin_init_libcurl [function] [call site] 00035
5 hts_version [function] [call site] 00036
5 curl_global_init [call site] 00037
5 easy_errno [function] [call site] 00038
6 curl_easy_getinfo [call site] 00039
6 curl_easy_getinfo [call site] 00040
6 http_status_errno [function] [call site] 00041
6 curl_easy_strerror [call site] 00042
5 __errno_location [call site] 00044
5 curl_share_init [call site] 00045
5 curl_global_cleanup [call site] 00046
5 curl_share_setopt [call site] 00047
5 share_lock [function] [call site] 00048
6 pthread_mutex_lock [call site] 00049
5 curl_share_setopt [call site] 00050
5 share_unlock [function] [call site] 00051
6 pthread_mutex_unlock [call site] 00052
5 curl_share_setopt [call site] 00053
5 curl_share_cleanup [call site] 00054
5 curl_global_cleanup [call site] 00055
5 __errno_location [call site] 00056
5 getenv [call site] 00057
5 strdup [call site] 00058
5 kh_init_auth_map [function] [call site] 00059
6 calloc [call site] 00060
5 __errno_location [call site] 00061
5 kh_destroy_auth_map [function] [call site] 00062
5 curl_share_cleanup [call site] 00063
5 curl_global_cleanup [call site] 00064
5 __errno_location [call site] 00065
5 getenv [call site] 00066
5 strcmp [call site] 00067
5 curl_version_info [call site] 00068
5 ksprintf [function] [call site] 00069
6 kvsprintf [function] [call site] 00070
7 vsnprintf [call site] 00082
7 ks_resize [function] [call site] 00083
7 vsnprintf [call site] 00084
5 libcurl_exit [function] [call site] 00085
6 curl_share_cleanup [call site] 00086
6 free_auth [function] [call site] 00087
7 pthread_mutex_destroy [call site] 00088
6 kh_destroy_auth_map [function] [call site] 00089
6 curl_global_cleanup [call site] 00090
5 hfile_add_scheme_handler [function] [call site] 00091
4 init_add_plugin [function] [call site] 00092
4 hfile_plugin_init_gcs [function] [call site] 00093
5 hfile_add_scheme_handler [function] [call site] 00094
5 hfile_add_scheme_handler [function] [call site] 00095
5 hfile_add_scheme_handler [function] [call site] 00096
4 init_add_plugin [function] [call site] 00097
4 hfile_plugin_init_s3 [function] [call site] 00098
5 hfile_add_scheme_handler [function] [call site] 00099
5 hfile_add_scheme_handler [function] [call site] 00100
5 hfile_add_scheme_handler [function] [call site] 00101
4 init_add_plugin [function] [call site] 00102
4 hfile_plugin_init_s3_write [function] [call site] 00103
5 hts_version [function] [call site] 00104
5 curl_global_init [call site] 00105
5 curl_share_init [call site] 00106
5 curl_global_cleanup [call site] 00107
5 __errno_location [call site] 00108
5 curl_share_setopt [call site] 00109
5 share_lock [function] [call site] 00110
6 pthread_mutex_lock [call site] 00111
5 curl_share_setopt [call site] 00112
5 share_unlock [function] [call site] 00113
6 pthread_mutex_unlock [call site] 00114
5 curl_share_setopt [call site] 00115
5 curl_share_cleanup [call site] 00116
5 curl_global_cleanup [call site] 00117
5 __errno_location [call site] 00118
5 curl_version_info [call site] 00119
5 s3_write_exit [function] [call site] 00121
6 curl_share_cleanup [call site] 00122
6 curl_global_cleanup [call site] 00123
5 hfile_add_scheme_handler [function] [call site] 00124
5 hfile_add_scheme_handler [function] [call site] 00125
5 hfile_add_scheme_handler [function] [call site] 00126
4 atexit [call site] 00127
4 hfile_exit [function] [call site] 00128
5 hfile_shutdown [function] [call site] 00129
6 pthread_mutex_lock [call site] 00130
6 kh_destroy_scheme_string [function] [call site] 00131
6 pthread_mutex_unlock [call site] 00132
5 pthread_mutex_destroy [call site] 00133
3 pthread_mutex_unlock [call site] 00134
3 pthread_mutex_unlock [call site] 00135
3 kh_get_scheme_string [function] [call site] 00136
2 strchr [call site] 00137
2 strcmp [call site] 00138
2 hopen_fd_stdinout [function] [call site] 00139
3 strchr [call site] 00140
3 hdopen [function] [call site] 00141
4 blksize [function] [call site] 00142
5 fstat [call site] 00143
4 strchr [call site] 00144
2 hopen_fd [function] [call site] 00145
3 hfile_oflags [function] [call site] 00146
3 open [call site] 00147
3 __errno_location [call site] 00149
3 hfile_destroy [function] [call site] 00150
4 __errno_location [call site] 00151
4 __errno_location [call site] 00152
1 hts_hopen [function] [call site] 00153
2 calloc [call site] 00154
2 strdup [call site] 00155
2 ed_is_big [function] [call site] 00156
2 strchr [call site] 00157
2 strncpy [call site] 00158
2 strncpy [call site] 00159
2 strchr [call site] 00160
2 hts_detect_format2 [function] [call site] 00161
3 hpeek [function] [call site] 00162
4 refill_buffer [function] [call site] 00163
5 __errno_location [call site] 00164
3 memcmp [call site] 00165
3 memcmp [call site] 00166
3 decompress_peek_gz [function] [call site] 00167
4 inflateInit2_ [call site] 00169
4 inflate [call site] 00170
4 inflateEnd [call site] 00171
3 memcmp [call site] 00172
3 memcmp [call site] 00173
3 memcmp [call site] 00174
3 memcmp [call site] 00175
3 decompress_peek_xz [function] [call site] 00176
4 lzma_easy_decoder_memusage [call site] 00178
4 lzma_code [call site] 00179
4 lzma_end [call site] 00180
4 lzma_end [call site] 00181
3 memcmp [call site] 00182
3 strcmp [call site] 00184
3 find_file_extension [function] [call site] 00185
4 strstr [call site] 00186
4 strlen [call site] 00187
3 tolower_c [function] [call site] 00188
3 memcmp [call site] 00189
3 memcmp [call site] 00190
3 memcmp [call site] 00191
3 memcmp [call site] 00192
3 memcmp [call site] 00193
3 memcmp [call site] 00194
3 memcmp [call site] 00195
3 strcmp [call site] 00196
3 memcmp [call site] 00197
3 parse_version [function] [call site] 00198
3 memcmp [call site] 00201
3 memcmp [call site] 00202
3 memcmp [call site] 00203
3 memcmp [call site] 00204
3 parse_version [function] [call site] 00205
3 memcmp [call site] 00206
3 cmp_nonblank [function] [call site] 00207
4 isspace_c [function] [call site] 00208
5 __ctype_b_loc [call site] 00209
3 memcmp [call site] 00210
3 is_fastaq [function] [call site] 00211
4 memchr [call site] 00212
4 is_text_only [function] [call site] 00213
4 toupper [call site] 00214
3 is_fastaq [function] [call site] 00215
3 parse_tabbed_text [function] [call site] 00216
4 isdigit_c [function] [call site] 00217
4 strchr [call site] 00218
4 isdigit_c [function] [call site] 00219
3 strstr [call site] 00222
3 strstr [call site] 00224
3 is_text_only [function] [call site] 00227
2 __errno_location [call site] 00228
2 hopen_htsget_redirect [function] [call site] 00229
3 hfile_init [function] [call site] 00230
4 strchr [call site] 00231
4 hfile_destroy [function] [call site] 00232
3 parse_ga4gh_redirect_json [function] [call site] 00233
4 hts_json_fnext [function] [call site] 00268
4 strcmp [call site] 00269
4 parse_ga4gh_body_json [function] [call site] 00270
5 hts_json_fnext [function] [call site] 00271
5 hts_json_fnext [function] [call site] 00272
5 strcmp [call site] 00273
5 hts_json_fnext [function] [call site] 00274
5 hts_json_fnext [function] [call site] 00275
5 hts_realloc_or_die [function] [call site] 00276
6 __errno_location [call site] 00277
6 realloc [call site] 00278
6 __errno_location [call site] 00279
6 exit [call site] 00281
5 hts_json_fnext [function] [call site] 00282
5 hts_json_fnext [function] [call site] 00283
5 kputs [function] [call site] 00284
6 __errno_location [call site] 00285
6 strlen [call site] 00286
5 hts_realloc_or_die [function] [call site] 00289
5 ks_release [function] [call site] 00290
5 hts_json_fskip_value [function] [call site] 00291
6 skip_value [function] [call site] 00292
5 strcmp [call site] 00293
5 hts_json_fnext [function] [call site] 00294
5 hts_json_fskip_value [function] [call site] 00296
4 hts_json_fnext [function] [call site] 00297
3 free_all_parts [function] [call site] 00298
4 free_part [function] [call site] 00299
3 hfile_destroy [function] [call site] 00300
3 __errno_location [call site] 00301
2 hts_crypt4gh_redirect [function] [call site] 00302
3 strlen [call site] 00303
3 snprintf [call site] 00304
2 hts_detect_format2 [function] [call site] 00306
2 strchr [call site] 00307
2 strchr [call site] 00308
2 strchr [call site] 00309
2 strchr [call site] 00310
2 strchr [call site] 00311
2 strchr [call site] 00312
2 strchr [call site] 00313
2 strchr [call site] 00314
2 abort [call site] 00315
2 format_category [function] [call site] 00316
2 __errno_location [call site] 00317
2 bgzf_hopen [function] [call site] 00318
3 bgzf_read_init [function] [call site] 00319
4 calloc [call site] 00321
4 memcmp [call site] 00322
4 memcmp [call site] 00323
4 razf_info [function] [call site] 00325
5 strcmp [call site] 00326
5 hseek [function] [call site] 00327
6 writebuffer_is_nonempty [function] [call site] 00328
6 flush_buffer [function] [call site] 00329
7 __errno_location [call site] 00330
6 __errno_location [call site] 00332
6 __errno_location [call site] 00333
6 __errno_location [call site] 00334
5 hread [function] [call site] 00335
6 hread2 [function] [call site] 00336
7 __errno_location [call site] 00337
7 refill_buffer [function] [call site] 00338
5 ed_is_big [function] [call site] 00339
4 __errno_location [call site] 00342
4 kh_init_cache [function] [call site] 00343
5 calloc [call site] 00344
3 strchr [call site] 00345
3 bgzf_write_init [function] [call site] 00346
4 calloc [call site] 00347
4 mode2level [function] [call site] 00348
5 strchr [call site] 00349
4 strchr [call site] 00350
4 deflateInit2_ [call site] 00351
4 bgzf_zerr [function] [call site] 00352
5 __errno_location [call site] 00353
5 snprintf [call site] 00354
4 __errno_location [call site] 00356
3 __errno_location [call site] 00358
3 ed_is_big [function] [call site] 00359
2 cram_dopen [function] [call site] 00360
3 calloc [call site] 00361
3 cram_read_file_def [function] [call site] 00362
3 cram_init_tables [function] [call site] 00366
4 cram_init_varint [function] [call site] 00367
5 uint7_get_32 [function] [call site] 00368
6 var_get_u32 [function] [call site] 00369
5 sint7_get_32 [function] [call site] 00370
6 var_get_s32 [function] [call site] 00371
7 var_get_u32 [function] [call site] 00372
5 uint7_get_64 [function] [call site] 00373
6 var_get_u64 [function] [call site] 00374
5 sint7_get_64 [function] [call site] 00375
6 var_get_s64 [function] [call site] 00376
7 var_get_u64 [function] [call site] 00377
5 uint7_put_32 [function] [call site] 00378
6 var_put_u32 [function] [call site] 00379
7 var_put_u32_safe [function] [call site] 00380
5 sint7_put_32 [function] [call site] 00381
6 var_put_s32 [function] [call site] 00382
7 var_put_u32 [function] [call site] 00383
5 uint7_put_64 [function] [call site] 00384
6 var_put_u64 [function] [call site] 00385
7 var_put_u64_safe [function] [call site] 00386
5 sint7_put_64 [function] [call site] 00387
6 var_put_s64 [function] [call site] 00388
7 var_put_u64 [function] [call site] 00389
5 uint7_put_blk_32 [function] [call site] 00390
6 var_put_u32 [function] [call site] 00391
6 block_append [function] [call site] 00392
7 block_grow [function] [call site] 00393
8 block_resize [function] [call site] 00394
9 block_resize_exact [function] [call site] 00395
10 realloc [call site] 00396
5 sint7_put_blk_32 [function] [call site] 00397
6 var_put_s32 [function] [call site] 00398
6 block_append [function] [call site] 00399
5 uint7_put_blk_64 [function] [call site] 00400
6 var_put_u64 [function] [call site] 00401
6 block_append [function] [call site] 00402
5 sint7_put_blk_64 [function] [call site] 00403
6 var_put_s64 [function] [call site] 00404
6 block_append [function] [call site] 00405
5 uint7_size [function] [call site] 00406
6 var_size_u64 [function] [call site] 00407
5 uint7_decode_crc32 [function] [call site] 00408
6 crc32 [call site] 00410
5 sint7_decode_crc32 [function] [call site] 00411
6 crc32 [call site] 00413
5 uint7_decode_crc64 [function] [call site] 00414
6 crc32 [call site] 00416
5 safe_itf8_get [function] [call site] 00417
5 safe_itf8_get [function] [call site] 00418
5 safe_ltf8_get [function] [call site] 00419
5 safe_ltf8_get [function] [call site] 00420
5 safe_itf8_put [function] [call site] 00421
5 safe_itf8_put [function] [call site] 00423
5 safe_ltf8_put [function] [call site] 00424
5 safe_ltf8_put [function] [call site] 00426
5 itf8_put_blk [function] [call site] 00427
6 block_append [function] [call site] 00429
5 itf8_put_blk [function] [call site] 00430
5 ltf8_put_blk [function] [call site] 00431
6 block_append [function] [call site] 00433
5 ltf8_put_blk [function] [call site] 00434
5 itf8_size [function] [call site] 00435
5 itf8_decode_crc [function] [call site] 00436
6 crc32 [call site] 00439
6 crc32 [call site] 00440
6 crc32 [call site] 00441
5 itf8_decode_crc [function] [call site] 00442
3 cram_read_SAM_hdr [function] [call site] 00461
4 cram_read_container [function] [call site] 00465
5 int32_decode [function] [call site] 00466
5 crc32 [call site] 00467
5 calloc [call site] 00468
5 __errno_location [call site] 00469
5 cram_free_container [function] [call site] 00470
6 cram_free_compression_header [function] [call site] 00471
7 kh_destroy_map [function] [call site] 00472
7 cram_free_block [function] [call site] 00473
7 kh_destroy_m_s2i [function] [call site] 00474
7 string_pool_destroy [function] [call site] 00475
6 cram_free_block [function] [call site] 00476
6 cram_free_slice [function] [call site] 00477
7 cram_free_block [function] [call site] 00478
7 cram_free_block [function] [call site] 00479
7 cram_free_slice_header [function] [call site] 00480
7 cram_free_block [function] [call site] 00481
7 cram_free_block [function] [call site] 00482
7 cram_free_block [function] [call site] 00483
7 cram_free_block [function] [call site] 00484
7 cram_free_block [function] [call site] 00485
7 cram_free_block [function] [call site] 00486
7 string_pool_destroy [function] [call site] 00487
7 kh_destroy_m_s2i [function] [call site] 00488
7 kh_destroy_m_s2i [function] [call site] 00489
6 cram_free_slice [function] [call site] 00490
6 cram_stats_free [function] [call site] 00491
7 kh_destroy_m_i2i [function] [call site] 00492
6 kh_destroy_m_tagmap [function] [call site] 00493
5 cram_free_container [function] [call site] 00494
5 int32_decode [function] [call site] 00495
5 cram_free_container [function] [call site] 00496
5 cram_free_container [function] [call site] 00498
4 cram_free_container [function] [call site] 00499
4 cram_free_container [function] [call site] 00508
4 cram_uncompress_block [function] [call site] 00509
5 crc32 [call site] 00510
5 __assert_fail [call site] 00512
5 zlib_mem_inflate [function] [call site] 00513
6 inflateInit2_ [call site] 00514
6 inflate [call site] 00516
6 inflateEnd [call site] 00518
6 realloc [call site] 00519
6 inflateEnd [call site] 00520
6 inflateEnd [call site] 00521
5 BZ2_bzBuffToBuffDecompress [call site] 00522
5 lzma_mem_inflate [function] [call site] 00523
6 lzma_easy_decoder_memusage [call site] 00524
6 realloc [call site] 00525
6 lzma_code [call site] 00526
6 lzma_code [call site] 00528
6 realloc [call site] 00530
6 lzma_end [call site] 00531
6 lzma_end [call site] 00532
5 rans_uncompress [function] [call site] 00533
6 rans_uncompress_O1 [function] [call site] 00534
7 htscodecs_tls_calloc [function] [call site] 00535
8 htscodecs_tls_alloc [function] [call site] 00536
9 pthread_once [call site] 00537
9 htscodecs_tls_init [function] [call site] 00538
10 pthread_key_create [call site] 00539
10 htscodecs_tls_free_all [function] [call site] 00540
11 fprintf [call site] 00541
9 pthread_getspecific [call site] 00542
9 calloc [call site] 00543
9 pthread_setspecific [call site] 00544
9 fprintf [call site] 00545
9 calloc [call site] 00546
7 RansDecSymbolInit32 [function] [call site] 00547
8 __assert_fail [call site] 00548
8 __assert_fail [call site] 00549
7 RansDecInit [function] [call site] 00550
7 RansDecInit [function] [call site] 00551
7 RansDecInit [function] [call site] 00552
7 RansDecInit [function] [call site] 00553
7 RansDecAdvanceStep [function] [call site] 00554
7 RansDecAdvanceStep [function] [call site] 00555
7 RansDecAdvanceStep [function] [call site] 00556
7 RansDecAdvanceStep [function] [call site] 00557
7 RansDecRenorm2 [function] [call site] 00558
7 RansDecRenorm2 [function] [call site] 00559
7 RansDecRenormSafe [function] [call site] 00560
7 RansDecRenormSafe [function] [call site] 00561
7 RansDecRenormSafe [function] [call site] 00562
7 RansDecRenormSafe [function] [call site] 00563
7 RansDecGet [function] [call site] 00564
7 RansDecRenormSafe [function] [call site] 00565
7 htscodecs_tls_free [function] [call site] 00566
8 pthread_getspecific [call site] 00567
8 fprintf [call site] 00568
8 fprintf [call site] 00569
6 rans_uncompress_O0 [function] [call site] 00570
7 RansDecInit [function] [call site] 00571
7 RansDecInit [function] [call site] 00572
7 RansDecInit [function] [call site] 00573
7 RansDecInit [function] [call site] 00574
7 RansDecRenorm2 [function] [call site] 00575
7 RansDecRenorm2 [function] [call site] 00576
7 RansDecRenormSafe [function] [call site] 00577
7 RansDecRenormSafe [function] [call site] 00578
7 RansDecRenormSafe [function] [call site] 00579
7 RansDecRenormSafe [function] [call site] 00580
5 fqz_decompress [function] [call site] 00581
6 uncompress_block_fqz2f [function] [call site] 00582
7 var_get_u32 [function] [call site] 00583
7 fqz_read_parameters [function] [call site] 00584
8 read_array [function] [call site] 00585
8 fqz_read_parameters1 [function] [call site] 00586
9 read_array [function] [call site] 00587
9 read_array [function] [call site] 00588
9 read_array [function] [call site] 00589
8 fqz_free_parameters [function] [call site] 00590
7 fqz_create_models [function] [call site] 00591
8 htscodecs_tls_alloc [function] [call site] 00592
8 SIMPLE_MODEL256_init [function] [call site] 00593
8 SIMPLE_MODEL256_init [function] [call site] 00594
8 SIMPLE_MODEL2_init [function] [call site] 00595
8 SIMPLE_MODEL2_init [function] [call site] 00596
8 SIMPLE_MODEL256_init [function] [call site] 00597
7 RC_SetInput [function] [call site] 00598
7 RC_StartDecode [function] [call site] 00599
7 realloc [call site] 00600
7 SIMPLE_MODEL256_decodeSymbol [function] [call site] 00601
8 RC_GetFreq [function] [call site] 00602
8 RC_Decode [function] [call site] 00603
8 SIMPLE_MODEL256_normalize [function] [call site] 00604
7 SIMPLE_MODEL256_decodeSymbol [function] [call site] 00605
7 SIMPLE_MODEL256_decodeSymbol [function] [call site] 00606
7 SIMPLE_MODEL256_decodeSymbol [function] [call site] 00607
7 SIMPLE_MODEL256_decodeSymbol [function] [call site] 00608
7 SIMPLE_MODEL2_decodeSymbol [function] [call site] 00609
7 SIMPLE_MODEL2_decodeSymbol [function] [call site] 00610
7 SIMPLE_MODEL256_decodeSymbol [function] [call site] 00611
7 fqz_update_ctx [function] [call site] 00612
7 realloc [call site] 00613
7 realloc [call site] 00614
7 RC_FinishDecode [function] [call site] 00615
7 fqz_destroy_models [function] [call site] 00616
8 htscodecs_tls_free [function] [call site] 00617
7 fqz_free_parameters [function] [call site] 00618
7 fqz_destroy_models [function] [call site] 00619
7 fqz_free_parameters [function] [call site] 00620
5 rans_uncompress_4x16 [function] [call site] 00621
6 rans_uncompress_to_4x16 [function] [call site] 00622
7 var_get_u32 [function] [call site] 00623
7 var_get_u32 [function] [call site] 00624
7 rans_uncompress_to_4x16 [function] [call site] 00625
8 var_get_u32 [function] [call site] 00627
8 hts_unpack_meta [function] [call site] 00628
8 var_get_u32 [function] [call site] 00629
8 var_get_u32 [function] [call site] 00630
8 var_get_u32 [function] [call site] 00631
8 var_get_u32 [function] [call site] 00632
8 rans_dec_func [function] [call site] 00633
9 __get_cpuid_max [function] [call site] 00634
9 rans_uncompress_O1_32x16_avx512 [function] [call site] 00635
10 htscodecs_tls_alloc [function] [call site] 00636
10 var_get_u32 [function] [call site] 00637
10 var_get_u32 [function] [call site] 00638
10 rans_uncompress_O0_4x16 [function] [call site] 00639
11 decode_freq [function] [call site] 00640
12 decode_alphabet [function] [call site] 00641
12 var_get_u32 [function] [call site] 00642
11 RansDecInit [function] [call site] 00643
11 RansDecInit [function] [call site] 00644
11 RansDecInit [function] [call site] 00645
11 RansDecInit [function] [call site] 00646
11 RansDecGet [function] [call site] 00647
11 RansDecGet [function] [call site] 00648
11 RansDecGet [function] [call site] 00649
11 RansDecGet [function] [call site] 00650
11 RansDecRenorm [function] [call site] 00651
11 RansDecRenorm [function] [call site] 00652
11 RansDecRenorm [function] [call site] 00653
11 RansDecRenorm [function] [call site] 00654
11 RansDecGet [function] [call site] 00655
11 RansDecRenormSafe [function] [call site] 00656
10 decode_freq1 [function] [call site] 00657
11 decode_alphabet [function] [call site] 00658
11 decode_freq_d [function] [call site] 00659
12 var_get_u32 [function] [call site] 00660
11 normalise_freq_shift [function] [call site] 00661
10 RansDecInit [function] [call site] 00662
10 transpose_and_copy [function] [call site] 00663
11 rot32_simd [function] [call site] 00664
12 _mm256_set_m128ix [function] [call site] 00665
12 _mm256_set_m128ix [function] [call site] 00666
12 _mm256_set_m128ix [function] [call site] 00667
12 _mm256_set_m128ix [function] [call site] 00668
10 RansDecRenormSafe [function] [call site] 00669
10 RansDecRenormSafe [function] [call site] 00670
10 transpose_and_copy [function] [call site] 00671
10 RansDecRenormSafe [function] [call site] 00672
10 RansDecRenormSafe [function] [call site] 00673
10 htscodecs_tls_free [function] [call site] 00674
10 htscodecs_tls_free [function] [call site] 00675
9 rans_uncompress_O1_32x16_avx2 [function] [call site] 00676
10 htscodecs_tls_alloc [function] [call site] 00677
10 var_get_u32 [function] [call site] 00678
10 var_get_u32 [function] [call site] 00679
10 rans_uncompress_O0_4x16 [function] [call site] 00680
10 decode_freq1 [function] [call site] 00681
10 RansDecInit [function] [call site] 00682
10 transpose_and_copy [function] [call site] 00683
11 rot32_simd [function] [call site] 00684
10 RansDecRenormSafe [function] [call site] 00685
10 RansDecRenormSafe [function] [call site] 00686
10 transpose_and_copy [function] [call site] 00687
10 RansDecRenormSafe [function] [call site] 00688
10 RansDecRenormSafe [function] [call site] 00689
10 htscodecs_tls_free [function] [call site] 00690
10 htscodecs_tls_free [function] [call site] 00691
9 rans_uncompress_O1_32x16_sse4 [function] [call site] 00692
10 htscodecs_tls_alloc [function] [call site] 00693
10 var_get_u32 [function] [call site] 00694
10 var_get_u32 [function] [call site] 00695
10 rans_uncompress_O0_4x16 [function] [call site] 00696
10 decode_freq1 [function] [call site] 00697
10 RansDecInit [function] [call site] 00698
10 _mm_i32gather_epi32x [function] [call site] 00699
10 _mm_i32gather_epi32x [function] [call site] 00700
10 _mm_i32gather_epi32x [function] [call site] 00701
10 _mm_i32gather_epi32x [function] [call site] 00702
10 _mm_i32gather_epi32x [function] [call site] 00703
10 _mm_i32gather_epi32x [function] [call site] 00704
10 _mm_i32gather_epi32x [function] [call site] 00705
10 _mm_i32gather_epi32x [function] [call site] 00706
10 transpose_and_copy [function] [call site] 00707
10 RansDecRenormSafe [function] [call site] 00708
10 RansDecRenormSafe [function] [call site] 00709
10 _mm_i32gather_epi32x [function] [call site] 00710
10 _mm_i32gather_epi32x [function] [call site] 00711
10 _mm_i32gather_epi32x [function] [call site] 00712
10 _mm_i32gather_epi32x [function] [call site] 00713
10 _mm_i32gather_epi32x [function] [call site] 00714
10 _mm_i32gather_epi32x [function] [call site] 00715
10 _mm_i32gather_epi32x [function] [call site] 00716
10 _mm_i32gather_epi32x [function] [call site] 00717
10 transpose_and_copy [function] [call site] 00718
10 RansDecRenormSafe [function] [call site] 00719
10 RansDecRenormSafe [function] [call site] 00720
10 htscodecs_tls_free [function] [call site] 00721
10 htscodecs_tls_free [function] [call site] 00722
9 rans_uncompress_O1_32x16 [function] [call site] 00723
10 htscodecs_tls_alloc [function] [call site] 00724
10 var_get_u32 [function] [call site] 00725
10 var_get_u32 [function] [call site] 00726
10 rans_uncompress_O0_4x16 [function] [call site] 00727
10 decode_freq1 [function] [call site] 00728
10 RansDecInit [function] [call site] 00729
10 RansDecRenorm [function] [call site] 00730
10 RansDecRenorm [function] [call site] 00731
10 RansDecRenorm [function] [call site] 00732
10 RansDecRenorm [function] [call site] 00733
10 RansDecRenormSafe [function] [call site] 00734
10 RansDecRenormSafe [function] [call site] 00735
10 RansDecRenormSafe [function] [call site] 00736
10 RansDecRenormSafe [function] [call site] 00737
10 RansDecRenormSafe [function] [call site] 00738
10 RansDecRenorm [function] [call site] 00739
10 RansDecRenorm [function] [call site] 00740
10 RansDecRenorm [function] [call site] 00741
10 RansDecRenorm [function] [call site] 00742
10 RansDecRenormSafe [function] [call site] 00743
10 RansDecRenormSafe [function] [call site] 00744
10 RansDecRenormSafe [function] [call site] 00745
10 RansDecRenormSafe [function] [call site] 00746
10 RansDecRenormSafe [function] [call site] 00747
10 htscodecs_tls_free [function] [call site] 00748
10 htscodecs_tls_free [function] [call site] 00749
9 rans_uncompress_O0_32x16_avx512 [function] [call site] 00750
10 decode_freq [function] [call site] 00751
10 normalise_freq_shift [function] [call site] 00752
10 rans_F_to_s3 [function] [call site] 00753
10 RansDecInit [function] [call site] 00754
9 rans_uncompress_O0_32x16_avx2 [function] [call site] 00755
10 decode_freq [function] [call site] 00756
10 normalise_freq_shift [function] [call site] 00757
10 rans_F_to_s3 [function] [call site] 00758
10 RansDecInit [function] [call site] 00759
9 rans_uncompress_O0_32x16_sse4 [function] [call site] 00760
10 decode_freq [function] [call site] 00761
10 rans_F_to_s3 [function] [call site] 00762
10 RansDecInit [function] [call site] 00763
10 _mm_i32gather_epi32x [function] [call site] 00764
10 _mm_i32gather_epi32x [function] [call site] 00765
10 _mm_i32gather_epi32x [function] [call site] 00766
10 _mm_i32gather_epi32x [function] [call site] 00767
10 _mm_i32gather_epi32x [function] [call site] 00768
10 _mm_i32gather_epi32x [function] [call site] 00769
10 _mm_i32gather_epi32x [function] [call site] 00770
10 _mm_i32gather_epi32x [function] [call site] 00771
9 rans_uncompress_O0_32x16 [function] [call site] 00772
10 decode_freq [function] [call site] 00773
10 normalise_freq_shift [function] [call site] 00774
10 rans_F_to_s3 [function] [call site] 00775
10 RansDecRenorm [function] [call site] 00776
10 RansDecRenorm [function] [call site] 00777
10 RansDecRenorm [function] [call site] 00778
10 RansDecRenorm [function] [call site] 00779
10 RansDecRenorm [function] [call site] 00780
10 RansDecRenorm [function] [call site] 00781
10 RansDecRenorm [function] [call site] 00782
10 RansDecRenorm [function] [call site] 00783
10 RansDecRenormSafe [function] [call site] 00784
10 RansDecRenormSafe [function] [call site] 00785
10 RansDecRenormSafe [function] [call site] 00786
10 RansDecRenormSafe [function] [call site] 00787
8 rans_dec_func [function] [call site] 00788
8 hts_rle_decode [function] [call site] 00789
9 var_get_u32 [function] [call site] 00790
8 hts_unpack [function] [call site] 00791
5 arith_uncompress_to [function] [call site] 00792
6 var_get_u32 [function] [call site] 00793
6 var_get_u32 [function] [call site] 00794
6 arith_uncompress_to [function] [call site] 00795
7 var_get_u32 [function] [call site] 00797
7 hts_unpack_meta [function] [call site] 00798
7 var_get_u32 [function] [call site] 00799
7 BZ2_bzBuffToBuffDecompress [call site] 00800
7 arith_uncompress_O1_RLE [function] [call site] 00801
8 htscodecs_tls_alloc [function] [call site] 00802
8 SIMPLE_MODEL256_init [function] [call site] 00803
8 htscodecs_tls_alloc [function] [call site] 00804
8 htscodecs_tls_free [function] [call site] 00805
8 SIMPLE_MODEL258_init [function] [call site] 00806
8 RC_SetInput [function] [call site] 00807
8 RC_StartDecode [function] [call site] 00808
8 SIMPLE_MODEL256_decodeSymbol [function] [call site] 00809
8 SIMPLE_MODEL258_decodeSymbol [function] [call site] 00810
8 RC_FinishDecode [function] [call site] 00811
8 htscodecs_tls_free [function] [call site] 00812
8 htscodecs_tls_free [function] [call site] 00813
7 arith_uncompress_O0_RLE [function] [call site] 00814
8 SIMPLE_MODEL256_init [function] [call site] 00815
8 htscodecs_tls_alloc [function] [call site] 00816
8 SIMPLE_MODEL258_init [function] [call site] 00817
8 RC_SetInput [function] [call site] 00818
8 RC_StartDecode [function] [call site] 00819
8 SIMPLE_MODEL256_decodeSymbol [function] [call site] 00820
8 SIMPLE_MODEL258_decodeSymbol [function] [call site] 00821
8 RC_FinishDecode [function] [call site] 00822
8 htscodecs_tls_free [function] [call site] 00823
7 arith_uncompress_O1 [function] [call site] 00824
8 htscodecs_tls_alloc [function] [call site] 00825
8 SIMPLE_MODEL256_init [function] [call site] 00826
8 RC_SetInput [function] [call site] 00827
8 RC_StartDecode [function] [call site] 00828
8 SIMPLE_MODEL256_decodeSymbol [function] [call site] 00829
8 RC_FinishDecode [function] [call site] 00830
8 htscodecs_tls_free [function] [call site] 00831
7 arith_uncompress_O0 [function] [call site] 00832
8 SIMPLE_MODEL256_init [function] [call site] 00833
8 RC_SetInput [function] [call site] 00834
8 SIMPLE_MODEL256_decodeSymbol [function] [call site] 00835
8 RC_FinishDecode [function] [call site] 00836
7 hts_unpack [function] [call site] 00837
5 tok3_decode_names [function] [call site] 00838
6 create_context [function] [call site] 00839
7 htscodecs_tls_alloc [function] [call site] 00840
6 uncompressed_size [function] [call site] 00841
7 var_get_u32 [function] [call site] 00842
7 var_get_u32 [function] [call site] 00843
6 uncompress [function] [call site] 00844
7 var_get_u32 [function] [call site] 00845
7 arith_decode [function] [call site] 00846
8 var_get_u32 [function] [call site] 00847
8 arith_uncompress_to [function] [call site] 00848
7 rans_decode [function] [call site] 00849
8 var_get_u32 [function] [call site] 00850
8 rans_uncompress_to_4x16 [function] [call site] 00851
6 decode_name [function] [call site] 00852
7 decode_token_type [function] [call site] 00853
7 decode_token_int [function] [call site] 00854
7 strlen [call site] 00855
7 strcpy [call site] 00856
7 strlen [call site] 00857
7 decode_token_type [function] [call site] 00858
7 decode_token_char [function] [call site] 00859
7 decode_token_alpha [function] [call site] 00860
7 decode_token_int1 [function] [call site] 00861
7 decode_token_int [function] [call site] 00862
7 append_uint32_fixed [function] [call site] 00863
7 decode_token_int1 [function] [call site] 00864
7 append_uint32_fixed [function] [call site] 00865
7 decode_token_int [function] [call site] 00866
7 append_uint32_var [function] [call site] 00867
7 decode_token_int1 [function] [call site] 00868
7 append_uint32_var [function] [call site] 00869
7 append_uint32_var [function] [call site] 00870
7 append_uint32_fixed [function] [call site] 00871
7 realloc [call site] 00872
6 free_context [function] [call site] 00873
7 pool_destroy [function] [call site] 00874
7 htscodecs_tls_free [function] [call site] 00875
6 free_context [function] [call site] 00876
4 cram_free_container [function] [call site] 00877
4 cram_free_block [function] [call site] 00878
4 int32_get_blk [function] [call site] 00879
4 cram_free_container [function] [call site] 00880
4 cram_free_block [function] [call site] 00881
4 cram_free_container [function] [call site] 00882
4 cram_free_block [function] [call site] 00883
4 cram_free_block [function] [call site] 00884
4 cram_read_block [function] [call site] 00885
4 cram_free_container [function] [call site] 00886
4 cram_free_block [function] [call site] 00887
4 cram_free_container [function] [call site] 00888
4 cram_free_container [function] [call site] 00890
4 cram_free_container [function] [call site] 00891
4 sam_hdr_init [function] [call site] 00892
5 calloc [call site] 00893
4 sam_hdr_add_lines [function] [call site] 00894
5 sam_hdr_fill_hrecs [function] [call site] 00895
6 sam_hrecs_new [function] [call site] 00896
7 calloc [call site] 00897
7 kh_init_sam_hrecs_t [function] [call site] 00898
8 calloc [call site] 00899
7 kh_init_m_s2i [function] [call site] 00900
8 calloc [call site] 00901
7 kh_init_m_s2i [function] [call site] 00902
7 kh_init_m_s2i [function] [call site] 00903
7 pool_create [function] [call site] 00904
8 next_power_2 [function] [call site] 00905
7 pool_create [function] [call site] 00906
7 string_pool_create [function] [call site] 00907
7 sam_hrecs_init_type_order [function] [call site] 00908
8 calloc [call site] 00909
7 kh_destroy_sam_hrecs_t [function] [call site] 00910
7 pool_destroy [function] [call site] 00911
7 pool_destroy [function] [call site] 00912
7 string_pool_destroy [function] [call site] 00913
6 sam_hrecs_refs_from_targets_array [function] [call site] 00914
7 realloc [call site] 00916
7 string_dup [function] [call site] 00917
8 string_ndup [function] [call site] 00918
9 string_alloc [function] [call site] 00919
10 new_string_pool [function] [call site] 00920
11 realloc [call site] 00921
7 kh_get_s2i